165 lines
5.8 KiB
Python
165 lines
5.8 KiB
Python
|
"""
|
||
|
===========================
|
||
|
Depth First Search on Edges
|
||
|
===========================
|
||
|
|
||
|
Algorithms for a depth-first traversal of edges in a graph.
|
||
|
|
||
|
"""
|
||
|
import networkx as nx
|
||
|
|
||
|
FORWARD = 'forward'
|
||
|
REVERSE = 'reverse'
|
||
|
|
||
|
__all__ = ['edge_dfs']
|
||
|
|
||
|
|
||
|
def edge_dfs(G, source=None, orientation=None):
|
||
|
"""A directed, depth-first-search of edges in `G`, beginning at `source`.
|
||
|
|
||
|
Yield the edges of G in a depth-first-search order continuing until
|
||
|
all edges are generated.
|
||
|
|
||
|
Parameters
|
||
|
----------
|
||
|
G : graph
|
||
|
A directed/undirected graph/multigraph.
|
||
|
|
||
|
source : node, list of nodes
|
||
|
The node from which the traversal begins. If None, then a source
|
||
|
is chosen arbitrarily and repeatedly until all edges from each node in
|
||
|
the graph are searched.
|
||
|
|
||
|
orientation : None | 'original' | 'reverse' | 'ignore' (default: None)
|
||
|
For directed graphs and directed multigraphs, edge traversals need not
|
||
|
respect the original orientation of the edges.
|
||
|
When set to 'reverse' every edge is traversed in the reverse direction.
|
||
|
When set to 'ignore', every edge is treated as undirected.
|
||
|
When set to 'original', every edge is treated as directed.
|
||
|
In all three cases, the yielded edge tuples add a last entry to
|
||
|
indicate the direction in which that edge was traversed.
|
||
|
If orientation is None, the yielded edge has no direction indicated.
|
||
|
The direction is respected, but not reported.
|
||
|
|
||
|
Yields
|
||
|
------
|
||
|
edge : directed edge
|
||
|
A directed edge indicating the path taken by the depth-first traversal.
|
||
|
For graphs, `edge` is of the form `(u, v)` where `u` and `v`
|
||
|
are the tail and head of the edge as determined by the traversal.
|
||
|
For multigraphs, `edge` is of the form `(u, v, key)`, where `key` is
|
||
|
the key of the edge. When the graph is directed, then `u` and `v`
|
||
|
are always in the order of the actual directed edge.
|
||
|
If orientation is not None then the edge tuple is extended to include
|
||
|
the direction of traversal ('forward' or 'reverse') on that edge.
|
||
|
|
||
|
Examples
|
||
|
--------
|
||
|
>>> import networkx as nx
|
||
|
>>> nodes = [0, 1, 2, 3]
|
||
|
>>> edges = [(0, 1), (1, 0), (1, 0), (2, 1), (3, 1)]
|
||
|
|
||
|
>>> list(nx.edge_dfs(nx.Graph(edges), nodes))
|
||
|
[(0, 1), (1, 2), (1, 3)]
|
||
|
|
||
|
>>> list(nx.edge_dfs(nx.DiGraph(edges), nodes))
|
||
|
[(0, 1), (1, 0), (2, 1), (3, 1)]
|
||
|
|
||
|
>>> list(nx.edge_dfs(nx.MultiGraph(edges), nodes))
|
||
|
[(0, 1, 0), (1, 0, 1), (0, 1, 2), (1, 2, 0), (1, 3, 0)]
|
||
|
|
||
|
>>> list(nx.edge_dfs(nx.MultiDiGraph(edges), nodes))
|
||
|
[(0, 1, 0), (1, 0, 0), (1, 0, 1), (2, 1, 0), (3, 1, 0)]
|
||
|
|
||
|
>>> list(nx.edge_dfs(nx.DiGraph(edges), nodes, orientation='ignore'))
|
||
|
[(0, 1, 'forward'), (1, 0, 'forward'), (2, 1, 'reverse'), (3, 1, 'reverse')]
|
||
|
|
||
|
>>> list(nx.edge_dfs(nx.MultiDiGraph(edges), nodes, orientation='ignore'))
|
||
|
[(0, 1, 0, 'forward'), (1, 0, 0, 'forward'), (1, 0, 1, 'reverse'), (2, 1, 0, 'reverse'), (3, 1, 0, 'reverse')]
|
||
|
|
||
|
Notes
|
||
|
-----
|
||
|
The goal of this function is to visit edges. It differs from the more
|
||
|
familiar depth-first traversal of nodes, as provided by
|
||
|
:func:`networkx.algorithms.traversal.depth_first_search.dfs_edges`, in
|
||
|
that it does not stop once every node has been visited. In a directed graph
|
||
|
with edges [(0, 1), (1, 2), (2, 1)], the edge (2, 1) would not be visited
|
||
|
if not for the functionality provided by this function.
|
||
|
|
||
|
See Also
|
||
|
--------
|
||
|
dfs_edges
|
||
|
|
||
|
"""
|
||
|
nodes = list(G.nbunch_iter(source))
|
||
|
if not nodes:
|
||
|
return
|
||
|
|
||
|
directed = G.is_directed()
|
||
|
kwds = {'data': False}
|
||
|
if G.is_multigraph() is True:
|
||
|
kwds['keys'] = True
|
||
|
|
||
|
# set up edge lookup
|
||
|
if orientation is None:
|
||
|
def edges_from(node):
|
||
|
return iter(G.edges(node, **kwds))
|
||
|
elif not directed or orientation == 'original':
|
||
|
def edges_from(node):
|
||
|
for e in G.edges(node, **kwds):
|
||
|
yield e + (FORWARD,)
|
||
|
elif orientation == 'reverse':
|
||
|
def edges_from(node):
|
||
|
for e in G.in_edges(node, **kwds):
|
||
|
yield e + (REVERSE,)
|
||
|
elif orientation == 'ignore':
|
||
|
def edges_from(node):
|
||
|
for e in G.edges(node, **kwds):
|
||
|
yield e + (FORWARD,)
|
||
|
for e in G.in_edges(node, **kwds):
|
||
|
yield e + (REVERSE,)
|
||
|
else:
|
||
|
raise nx.NetworkXError("invalid orientation argument.")
|
||
|
|
||
|
# set up formation of edge_id to easily look up if edge already returned
|
||
|
if directed:
|
||
|
def edge_id(edge):
|
||
|
# remove direction indicator
|
||
|
return edge[:-1] if orientation is not None else edge
|
||
|
else:
|
||
|
def edge_id(edge):
|
||
|
# single id for undirected requires frozenset on nodes
|
||
|
return (frozenset(edge[:2]),) + edge[2:]
|
||
|
|
||
|
# Basic setup
|
||
|
check_reverse = directed and orientation in ('reverse', 'ignore')
|
||
|
|
||
|
visited_edges = set()
|
||
|
visited_nodes = set()
|
||
|
edges = {}
|
||
|
|
||
|
# start DFS
|
||
|
for start_node in nodes:
|
||
|
stack = [start_node]
|
||
|
while stack:
|
||
|
current_node = stack[-1]
|
||
|
if current_node not in visited_nodes:
|
||
|
edges[current_node] = edges_from(current_node)
|
||
|
visited_nodes.add(current_node)
|
||
|
|
||
|
try:
|
||
|
edge = next(edges[current_node])
|
||
|
except StopIteration:
|
||
|
# No more edges from the current node.
|
||
|
stack.pop()
|
||
|
else:
|
||
|
edgeid = edge_id(edge)
|
||
|
if edgeid not in visited_edges:
|
||
|
visited_edges.add(edgeid)
|
||
|
# Mark the traversed "to" node as to-be-explored.
|
||
|
if check_reverse and edge[-1] == REVERSE:
|
||
|
stack.append(edge[0])
|
||
|
else:
|
||
|
stack.append(edge[1])
|
||
|
yield edge
|