import pytest import networkx as nx class TestSubGraphView(object): gview = staticmethod(nx.graphviews.subgraph_view) graph = nx.Graph hide_edges_filter = staticmethod(nx.filters.hide_edges) show_edges_filter = staticmethod(nx.filters.show_edges) @classmethod def setup_class(cls): cls.G = nx.path_graph(9, create_using=cls.graph()) cls.hide_edges_w_hide_nodes = {(3, 4), (4, 5), (5, 6)} def test_hidden_nodes(self): hide_nodes = [4, 5, 111] nodes_gone = nx.filters.hide_nodes(hide_nodes) gview = self.gview print(gview) G = gview(self.G, filter_node=nodes_gone) assert self.G.nodes - G.nodes == {4, 5} assert self.G.edges - G.edges == self.hide_edges_w_hide_nodes if G.is_directed(): assert list(G[3]) == [] assert list(G[2]) == [3] else: assert list(G[3]) == [2] assert set(G[2]) == {1, 3} pytest.raises(KeyError, G.__getitem__, 4) pytest.raises(KeyError, G.__getitem__, 112) pytest.raises(KeyError, G.__getitem__, 111) assert G.degree(3) == (3 if G.is_multigraph() else 1) assert G.size() == (7 if G.is_multigraph() else 5) def test_hidden_edges(self): hide_edges = [(2, 3), (8, 7), (222, 223)] edges_gone = self.hide_edges_filter(hide_edges) gview = self.gview G = gview(self.G, filter_edge=edges_gone) assert self.G.nodes == G.nodes if G.is_directed(): assert self.G.edges - G.edges == {(2, 3)} assert list(G[2]) == [] assert list(G.pred[3]) == [] assert list(G.pred[2]) == [1] assert G.size() == 7 else: assert self.G.edges - G.edges == {(2, 3), (7, 8)} assert list(G[2]) == [1] assert G.size() == 6 assert list(G[3]) == [4] pytest.raises(KeyError, G.__getitem__, 221) pytest.raises(KeyError, G.__getitem__, 222) assert G.degree(3) == 1 def test_shown_node(self): induced_subgraph = nx.filters.show_nodes([2, 3, 111]) gview = self.gview G = gview(self.G, filter_node=induced_subgraph) assert set(G.nodes) == {2, 3} if G.is_directed(): assert list(G[3]) == [] else: assert list(G[3]) == [2] assert list(G[2]) == [3] pytest.raises(KeyError, G.__getitem__, 4) pytest.raises(KeyError, G.__getitem__, 112) pytest.raises(KeyError, G.__getitem__, 111) assert G.degree(3) == (3 if G.is_multigraph() else 1) assert G.size() == (3 if G.is_multigraph() else 1) def test_shown_edges(self): show_edges = [(2, 3), (8, 7), (222, 223)] edge_subgraph = self.show_edges_filter(show_edges) G = self.gview(self.G, filter_edge=edge_subgraph) assert self.G.nodes == G.nodes if G.is_directed(): assert G.edges == {(2, 3)} assert list(G[3]) == [] assert list(G[2]) == [3] assert list(G.pred[3]) == [2] assert list(G.pred[2]) == [] assert G.size() == 1 else: assert G.edges == {(2, 3), (7, 8)} assert list(G[3]) == [2] assert list(G[2]) == [3] assert G.size() == 2 pytest.raises(KeyError, G.__getitem__, 221) pytest.raises(KeyError, G.__getitem__, 222) assert G.degree(3) == 1 class TestSubDiGraphView(TestSubGraphView): gview = staticmethod(nx.graphviews.subgraph_view) graph = nx.DiGraph hide_edges_filter = staticmethod(nx.filters.hide_diedges) show_edges_filter = staticmethod(nx.filters.show_diedges) hide_edges = [(2, 3), (8, 7), (222, 223)] excluded = {(2, 3), (3, 4), (4, 5), (5, 6)} def test_inoutedges(self): edges_gone = self.hide_edges_filter(self.hide_edges) hide_nodes = [4, 5, 111] nodes_gone = nx.filters.hide_nodes(hide_nodes) G = self.gview(self.G, nodes_gone, edges_gone) assert self.G.in_edges - G.in_edges == self.excluded assert self.G.out_edges - G.out_edges == self.excluded def test_pred(self): edges_gone = self.hide_edges_filter(self.hide_edges) hide_nodes = [4, 5, 111] nodes_gone = nx.filters.hide_nodes(hide_nodes) G = self.gview(self.G, nodes_gone, edges_gone) assert list(G.pred[2]) == [1] assert list(G.pred[6]) == [] def test_inout_degree(self): edges_gone = self.hide_edges_filter(self.hide_edges) hide_nodes = [4, 5, 111] nodes_gone = nx.filters.hide_nodes(hide_nodes) G = self.gview(self.G, nodes_gone, edges_gone) assert G.degree(2) == 1 assert G.out_degree(2) == 0 assert G.in_degree(2) == 1 assert G.size() == 4 # multigraph class TestMultiGraphView(TestSubGraphView): gview = staticmethod(nx.graphviews.subgraph_view) graph = nx.MultiGraph hide_edges_filter = staticmethod(nx.filters.hide_multiedges) show_edges_filter = staticmethod(nx.filters.show_multiedges) @classmethod def setup_class(cls): cls.G = nx.path_graph(9, create_using=cls.graph()) multiedges = {(2, 3, 4), (2, 3, 5)} cls.G.add_edges_from(multiedges) cls.hide_edges_w_hide_nodes = {(3, 4, 0), (4, 5, 0), (5, 6, 0)} def test_hidden_edges(self): hide_edges = [(2, 3, 4), (2, 3, 3), (8, 7, 0), (222, 223, 0)] edges_gone = self.hide_edges_filter(hide_edges) G = self.gview(self.G, filter_edge=edges_gone) assert self.G.nodes == G.nodes if G.is_directed(): assert self.G.edges - G.edges == {(2, 3, 4)} assert list(G[3]) == [4] assert list(G[2]) == [3] assert list(G.pred[3]) == [2] # only one 2 but two edges assert list(G.pred[2]) == [1] assert G.size() == 9 else: assert self.G.edges - G.edges == {(2, 3, 4), (7, 8, 0)} assert list(G[3]) == [2, 4] assert list(G[2]) == [1, 3] assert G.size() == 8 assert G.degree(3) == 3 pytest.raises(KeyError, G.__getitem__, 221) pytest.raises(KeyError, G.__getitem__, 222) def test_shown_edges(self): show_edges = [(2, 3, 4), (2, 3, 3), (8, 7, 0), (222, 223, 0)] edge_subgraph = self.show_edges_filter(show_edges) G = self.gview(self.G, filter_edge=edge_subgraph) assert self.G.nodes == G.nodes if G.is_directed(): assert G.edges == {(2, 3, 4)} assert list(G[3]) == [] assert list(G.pred[3]) == [2] assert list(G.pred[2]) == [] assert G.size() == 1 else: assert G.edges == {(2, 3, 4), (7, 8, 0)} assert G.size() == 2 assert list(G[3]) == [2] assert G.degree(3) == 1 assert list(G[2]) == [3] pytest.raises(KeyError, G.__getitem__, 221) pytest.raises(KeyError, G.__getitem__, 222) # multidigraph class TestMultiDiGraphView(TestMultiGraphView, TestSubDiGraphView): gview = staticmethod(nx.graphviews.subgraph_view) graph = nx.MultiDiGraph hide_edges_filter = staticmethod(nx.filters.hide_multidiedges) show_edges_filter = staticmethod(nx.filters.show_multidiedges) hide_edges = [(2, 3, 0), (8, 7, 0), (222, 223, 0)] excluded = {(2, 3, 0), (3, 4, 0), (4, 5, 0), (5, 6, 0)} def test_inout_degree(self): edges_gone = self.hide_edges_filter(self.hide_edges) hide_nodes = [4, 5, 111] nodes_gone = nx.filters.hide_nodes(hide_nodes) G = self.gview(self.G, nodes_gone, edges_gone) assert G.degree(2) == 3 assert G.out_degree(2) == 2 assert G.in_degree(2) == 1 assert G.size() == 6 # induced_subgraph class TestInducedSubGraph(object): @classmethod def setup_class(cls): cls.K3 = G = nx.complete_graph(3) G.graph['foo'] = [] G.nodes[0]['foo'] = [] G.remove_edge(1, 2) ll = [] G.add_edge(1, 2, foo=ll) G.add_edge(2, 1, foo=ll) def test_full_graph(self): G = self.K3 H = nx.induced_subgraph(G, [0, 1, 2, 5]) assert H.name == G.name self.graphs_equal(H, G) self.same_attrdict(H, G) def test_partial_subgraph(self): G = self.K3 H = nx.induced_subgraph(G, 0) assert dict(H.adj) == {0: {}} assert dict(G.adj) != {0: {}} H = nx.induced_subgraph(G, [0, 1]) assert dict(H.adj) == {0: {1: {}}, 1: {0: {}}} def same_attrdict(self, H, G): old_foo = H[1][2]['foo'] H.edges[1, 2]['foo'] = 'baz' assert G.edges == H.edges H.edges[1, 2]['foo'] = old_foo assert G.edges == H.edges old_foo = H.nodes[0]['foo'] H.nodes[0]['foo'] = 'baz' assert G.nodes == H.nodes H.nodes[0]['foo'] = old_foo assert G.nodes == H.nodes def graphs_equal(self, H, G): assert G._adj == H._adj assert G._node == H._node assert G.graph == H.graph assert G.name == H.name if not G.is_directed() and not H.is_directed(): assert H._adj[1][2] is H._adj[2][1] assert G._adj[1][2] is G._adj[2][1] else: # at least one is directed if not G.is_directed(): G._pred = G._adj G._succ = G._adj if not H.is_directed(): H._pred = H._adj H._succ = H._adj assert G._pred == H._pred assert G._succ == H._succ assert H._succ[1][2] is H._pred[2][1] assert G._succ[1][2] is G._pred[2][1] # edge_subgraph class TestEdgeSubGraph(object): @classmethod def setup_class(cls): # Create a path graph on five nodes. cls.G = G = nx.path_graph(5) # Add some node, edge, and graph attributes. for i in range(5): G.nodes[i]['name'] = 'node{}'.format(i) G.edges[0, 1]['name'] = 'edge01' G.edges[3, 4]['name'] = 'edge34' G.graph['name'] = 'graph' # Get the subgraph induced by the first and last edges. cls.H = nx.edge_subgraph(G, [(0, 1), (3, 4)]) def test_correct_nodes(self): """Tests that the subgraph has the correct nodes.""" assert [0, 1, 3, 4] == sorted(self.H.nodes) def test_correct_edges(self): """Tests that the subgraph has the correct edges.""" assert ([(0, 1, 'edge01'), (3, 4, 'edge34')] == sorted(self.H.edges(data='name'))) def test_add_node(self): """Tests that adding a node to the original graph does not affect the nodes of the subgraph. """ self.G.add_node(5) assert [0, 1, 3, 4] == sorted(self.H.nodes) self.G.remove_node(5) def test_remove_node(self): """Tests that removing a node in the original graph removes the nodes of the subgraph. """ self.G.remove_node(0) assert [1, 3, 4] == sorted(self.H.nodes) self.G.add_edge(0, 1) def test_node_attr_dict(self): """Tests that the node attribute dictionary of the two graphs is the same object. """ for v in self.H: assert self.G.nodes[v] == self.H.nodes[v] # Making a change to G should make a change in H and vice versa. self.G.nodes[0]['name'] = 'foo' assert self.G.nodes[0] == self.H.nodes[0] self.H.nodes[1]['name'] = 'bar' assert self.G.nodes[1] == self.H.nodes[1] def test_edge_attr_dict(self): """Tests that the edge attribute dictionary of the two graphs is the same object. """ for u, v in self.H.edges(): assert self.G.edges[u, v] == self.H.edges[u, v] # Making a change to G should make a change in H and vice versa. self.G.edges[0, 1]['name'] = 'foo' assert (self.G.edges[0, 1]['name'] == self.H.edges[0, 1]['name']) self.H.edges[3, 4]['name'] = 'bar' assert (self.G.edges[3, 4]['name'] == self.H.edges[3, 4]['name']) def test_graph_attr_dict(self): """Tests that the graph attribute dictionary of the two graphs is the same object. """ assert self.G.graph is self.H.graph def test_readonly(self): """Tests that the subgraph cannot change the graph structure""" pytest.raises(nx.NetworkXError, self.H.add_node, 5) pytest.raises(nx.NetworkXError, self.H.remove_node, 0) pytest.raises(nx.NetworkXError, self.H.add_edge, 5, 6) pytest.raises(nx.NetworkXError, self.H.remove_edge, 0, 1)