This repository has been archived on 2023-03-25. You can view files and clone it, but cannot push or open issues or pull requests.
mightyscape-1.1-deprecated/extensions/networkx/algorithms/centrality/tests/test_betweenness_centrality.py
2020-07-30 01:16:18 +02:00

659 lines
24 KiB
Python

#!/usr/bin/env python
import networkx as nx
from networkx.testing import almost_equal
def weighted_G():
G = nx.Graph()
G.add_edge(0, 1, weight=3)
G.add_edge(0, 2, weight=2)
G.add_edge(0, 3, weight=6)
G.add_edge(0, 4, weight=4)
G.add_edge(1, 3, weight=5)
G.add_edge(1, 5, weight=5)
G.add_edge(2, 4, weight=1)
G.add_edge(3, 4, weight=2)
G.add_edge(3, 5, weight=1)
G.add_edge(4, 5, weight=4)
return G
class TestBetweennessCentrality(object):
def test_K5(self):
"""Betweenness centrality: K5"""
G = nx.complete_graph(5)
b = nx.betweenness_centrality(G,
weight=None,
normalized=False)
b_answer = {0: 0.0, 1: 0.0, 2: 0.0, 3: 0.0, 4: 0.0}
for n in sorted(G):
assert almost_equal(b[n], b_answer[n])
def test_K5_endpoints(self):
"""Betweenness centrality: K5 endpoints"""
G = nx.complete_graph(5)
b = nx.betweenness_centrality(G,
weight=None,
normalized=False,
endpoints=True)
b_answer = {0: 4.0, 1: 4.0, 2: 4.0, 3: 4.0, 4: 4.0}
for n in sorted(G):
assert almost_equal(b[n], b_answer[n])
# normalized = True case
b = nx.betweenness_centrality(G,
weight=None,
normalized=True,
endpoints=True)
b_answer = {0: 0.4, 1: 0.4, 2: 0.4, 3: 0.4, 4: 0.4}
for n in sorted(G):
assert almost_equal(b[n], b_answer[n])
def test_P3_normalized(self):
"""Betweenness centrality: P3 normalized"""
G = nx.path_graph(3)
b = nx.betweenness_centrality(G,
weight=None,
normalized=True)
b_answer = {0: 0.0, 1: 1.0, 2: 0.0}
for n in sorted(G):
assert almost_equal(b[n], b_answer[n])
def test_P3(self):
"""Betweenness centrality: P3"""
G = nx.path_graph(3)
b_answer = {0: 0.0, 1: 1.0, 2: 0.0}
b = nx.betweenness_centrality(G,
weight=None,
normalized=False)
for n in sorted(G):
assert almost_equal(b[n], b_answer[n])
def test_sample_from_P3(self):
G= nx.path_graph(3)
b_answer = {0: 0.0, 1: 1.0, 2: 0.0}
b = nx.betweenness_centrality(G,
k=3,
weight=None,
normalized=False,
seed=1)
for n in sorted(G):
assert almost_equal(b[n], b_answer[n])
b = nx.betweenness_centrality(G,
k=2,
weight=None,
normalized=False,
seed=1)
# python versions give different results with same seed
b_approx1 = {0: 0.0, 1: 1.5, 2: 0.0}
b_approx2 = {0: 0.0, 1: 0.75, 2: 0.0}
for n in sorted(G):
assert b[n] in (b_approx1[n], b_approx2[n])
def test_P3_endpoints(self):
"""Betweenness centrality: P3 endpoints"""
G = nx.path_graph(3)
b_answer = {0: 2.0, 1: 3.0, 2: 2.0}
b = nx.betweenness_centrality(G,
weight=None,
normalized=False,
endpoints=True)
for n in sorted(G):
assert almost_equal(b[n], b_answer[n])
# normalized = True case
b_answer = {0: 2/3, 1: 1.0, 2: 2/3}
b = nx.betweenness_centrality(G,
weight=None,
normalized=True,
endpoints=True)
for n in sorted(G):
assert almost_equal(b[n], b_answer[n])
def test_krackhardt_kite_graph(self):
"""Betweenness centrality: Krackhardt kite graph"""
G = nx.krackhardt_kite_graph()
b_answer = {0: 1.667, 1: 1.667, 2: 0.000, 3: 7.333, 4: 0.000,
5: 16.667, 6: 16.667, 7: 28.000, 8: 16.000, 9: 0.000}
for b in b_answer:
b_answer[b] /= 2
b = nx.betweenness_centrality(G,
weight=None,
normalized=False)
for n in sorted(G):
assert almost_equal(b[n], b_answer[n], places=3)
def test_krackhardt_kite_graph_normalized(self):
"""Betweenness centrality: Krackhardt kite graph normalized"""
G = nx.krackhardt_kite_graph()
b_answer = {0: 0.023, 1: 0.023, 2: 0.000, 3: 0.102, 4: 0.000,
5: 0.231, 6: 0.231, 7: 0.389, 8: 0.222, 9: 0.000}
b = nx.betweenness_centrality(G,
weight=None,
normalized=True)
for n in sorted(G):
assert almost_equal(b[n], b_answer[n], places=3)
def test_florentine_families_graph(self):
"""Betweenness centrality: Florentine families graph"""
G = nx.florentine_families_graph()
b_answer =\
{'Acciaiuoli': 0.000,
'Albizzi': 0.212,
'Barbadori': 0.093,
'Bischeri': 0.104,
'Castellani': 0.055,
'Ginori': 0.000,
'Guadagni': 0.255,
'Lamberteschi': 0.000,
'Medici': 0.522,
'Pazzi': 0.000,
'Peruzzi': 0.022,
'Ridolfi': 0.114,
'Salviati': 0.143,
'Strozzi': 0.103,
'Tornabuoni': 0.092}
b = nx.betweenness_centrality(G,
weight=None,
normalized=True)
for n in sorted(G):
assert almost_equal(b[n], b_answer[n], places=3)
def test_les_miserables_graph(self):
"""Betweenness centrality: Les Miserables graph"""
G = nx.les_miserables_graph()
b_answer = \
{'Napoleon': 0.000,
'Myriel': 0.177,
'MlleBaptistine': 0.000,
'MmeMagloire': 0.000,
'CountessDeLo': 0.000,
'Geborand': 0.000,
'Champtercier': 0.000,
'Cravatte': 0.000,
'Count': 0.000,
'OldMan': 0.000,
'Valjean': 0.570,
'Labarre': 0.000,
'Marguerite': 0.000,
'MmeDeR': 0.000,
'Isabeau': 0.000,
'Gervais': 0.000,
'Listolier': 0.000,
'Tholomyes': 0.041,
'Fameuil': 0.000,
'Blacheville': 0.000,
'Favourite': 0.000,
'Dahlia': 0.000,
'Zephine': 0.000,
'Fantine': 0.130,
'MmeThenardier': 0.029,
'Thenardier': 0.075,
'Cosette': 0.024,
'Javert': 0.054,
'Fauchelevent': 0.026,
'Bamatabois': 0.008,
'Perpetue': 0.000,
'Simplice': 0.009,
'Scaufflaire': 0.000,
'Woman1': 0.000,
'Judge': 0.000,
'Champmathieu': 0.000,
'Brevet': 0.000,
'Chenildieu': 0.000,
'Cochepaille': 0.000,
'Pontmercy': 0.007,
'Boulatruelle': 0.000,
'Eponine': 0.011,
'Anzelma': 0.000,
'Woman2': 0.000,
'MotherInnocent': 0.000,
'Gribier': 0.000,
'MmeBurgon': 0.026,
'Jondrette': 0.000,
'Gavroche': 0.165,
'Gillenormand': 0.020,
'Magnon': 0.000,
'MlleGillenormand': 0.048,
'MmePontmercy': 0.000,
'MlleVaubois': 0.000,
'LtGillenormand': 0.000,
'Marius': 0.132,
'BaronessT': 0.000,
'Mabeuf': 0.028,
'Enjolras': 0.043,
'Combeferre': 0.001,
'Prouvaire': 0.000,
'Feuilly': 0.001,
'Courfeyrac': 0.005,
'Bahorel': 0.002,
'Bossuet': 0.031,
'Joly': 0.002,
'Grantaire': 0.000,
'MotherPlutarch': 0.000,
'Gueulemer': 0.005,
'Babet': 0.005,
'Claquesous': 0.005,
'Montparnasse': 0.004,
'Toussaint': 0.000,
'Child1': 0.000,
'Child2': 0.000,
'Brujon': 0.000,
'MmeHucheloup': 0.000}
b = nx.betweenness_centrality(G,
weight=None,
normalized=True)
for n in sorted(G):
assert almost_equal(b[n], b_answer[n], places=3)
def test_ladder_graph(self):
"""Betweenness centrality: Ladder graph"""
G = nx.Graph() # ladder_graph(3)
G.add_edges_from([(0, 1), (0, 2), (1, 3), (2, 3),
(2, 4), (4, 5), (3, 5)])
b_answer = {0: 1.667, 1: 1.667, 2: 6.667,
3: 6.667, 4: 1.667, 5: 1.667}
for b in b_answer:
b_answer[b] /= 2
b = nx.betweenness_centrality(G,
weight=None,
normalized=False)
for n in sorted(G):
assert almost_equal(b[n], b_answer[n], places=3)
def test_disconnected_path(self):
"""Betweenness centrality: disconnected path"""
G = nx.Graph()
nx.add_path(G, [0, 1, 2])
nx.add_path(G, [3, 4, 5, 6])
b_answer = {0: 0, 1: 1, 2: 0, 3: 0, 4: 2, 5: 2, 6: 0}
b = nx.betweenness_centrality(G,
weight=None,
normalized=False)
for n in sorted(G):
assert almost_equal(b[n], b_answer[n])
def test_disconnected_path_endpoints(self):
"""Betweenness centrality: disconnected path endpoints"""
G = nx.Graph()
nx.add_path(G, [0, 1, 2])
nx.add_path(G, [3, 4, 5, 6])
b_answer = {0: 2, 1: 3, 2: 2, 3: 3, 4: 5, 5: 5, 6: 3}
b = nx.betweenness_centrality(G,
weight=None,
normalized=False,
endpoints=True)
for n in sorted(G):
assert almost_equal(b[n], b_answer[n])
# normalized = True case
b = nx.betweenness_centrality(G,
weight=None,
normalized=True,
endpoints=True)
for n in sorted(G):
assert almost_equal(b[n], b_answer[n] / 21)
def test_directed_path(self):
"""Betweenness centrality: directed path"""
G = nx.DiGraph()
nx.add_path(G, [0, 1, 2])
b = nx.betweenness_centrality(G,
weight=None,
normalized=False)
b_answer = {0: 0.0, 1: 1.0, 2: 0.0}
for n in sorted(G):
assert almost_equal(b[n], b_answer[n])
def test_directed_path_normalized(self):
"""Betweenness centrality: directed path normalized"""
G = nx.DiGraph()
nx.add_path(G, [0, 1, 2])
b = nx.betweenness_centrality(G,
weight=None,
normalized=True)
b_answer = {0: 0.0, 1: 0.5, 2: 0.0}
for n in sorted(G):
assert almost_equal(b[n], b_answer[n])
class TestWeightedBetweennessCentrality(object):
def test_K5(self):
"""Weighted betweenness centrality: K5"""
G = nx.complete_graph(5)
b = nx.betweenness_centrality(G,
weight='weight',
normalized=False)
b_answer = {0: 0.0, 1: 0.0, 2: 0.0, 3: 0.0, 4: 0.0}
for n in sorted(G):
assert almost_equal(b[n], b_answer[n])
def test_P3_normalized(self):
"""Weighted betweenness centrality: P3 normalized"""
G = nx.path_graph(3)
b = nx.betweenness_centrality(G,
weight='weight',
normalized=True)
b_answer = {0: 0.0, 1: 1.0, 2: 0.0}
for n in sorted(G):
assert almost_equal(b[n], b_answer[n])
def test_P3(self):
"""Weighted betweenness centrality: P3"""
G = nx.path_graph(3)
b_answer = {0: 0.0, 1: 1.0, 2: 0.0}
b = nx.betweenness_centrality(G,
weight='weight',
normalized=False)
for n in sorted(G):
assert almost_equal(b[n], b_answer[n])
def test_krackhardt_kite_graph(self):
"""Weighted betweenness centrality: Krackhardt kite graph"""
G = nx.krackhardt_kite_graph()
b_answer = {0: 1.667, 1: 1.667, 2: 0.000, 3: 7.333, 4: 0.000,
5: 16.667, 6: 16.667, 7: 28.000, 8: 16.000, 9: 0.000}
for b in b_answer:
b_answer[b] /= 2
b = nx.betweenness_centrality(G,
weight='weight',
normalized=False)
for n in sorted(G):
assert almost_equal(b[n], b_answer[n], places=3)
def test_krackhardt_kite_graph_normalized(self):
"""Weighted betweenness centrality:
Krackhardt kite graph normalized
"""
G = nx.krackhardt_kite_graph()
b_answer = {0: 0.023, 1: 0.023, 2: 0.000, 3: 0.102, 4: 0.000,
5: 0.231, 6: 0.231, 7: 0.389, 8: 0.222, 9: 0.000}
b = nx.betweenness_centrality(G,
weight='weight',
normalized=True)
for n in sorted(G):
assert almost_equal(b[n], b_answer[n], places=3)
def test_florentine_families_graph(self):
"""Weighted betweenness centrality:
Florentine families graph"""
G = nx.florentine_families_graph()
b_answer = \
{'Acciaiuoli': 0.000,
'Albizzi': 0.212,
'Barbadori': 0.093,
'Bischeri': 0.104,
'Castellani': 0.055,
'Ginori': 0.000,
'Guadagni': 0.255,
'Lamberteschi': 0.000,
'Medici': 0.522,
'Pazzi': 0.000,
'Peruzzi': 0.022,
'Ridolfi': 0.114,
'Salviati': 0.143,
'Strozzi': 0.103,
'Tornabuoni': 0.092}
b = nx.betweenness_centrality(G,
weight='weight',
normalized=True)
for n in sorted(G):
assert almost_equal(b[n], b_answer[n], places=3)
def test_les_miserables_graph(self):
"""Weighted betweenness centrality: Les Miserables graph"""
G = nx.les_miserables_graph()
b_answer = \
{'Napoleon': 0.000,
'Myriel': 0.177,
'MlleBaptistine': 0.000,
'MmeMagloire': 0.000,
'CountessDeLo': 0.000,
'Geborand': 0.000,
'Champtercier': 0.000,
'Cravatte': 0.000,
'Count': 0.000,
'OldMan': 0.000,
'Valjean': 0.454,
'Labarre': 0.000,
'Marguerite': 0.009,
'MmeDeR': 0.000,
'Isabeau': 0.000,
'Gervais': 0.000,
'Listolier': 0.000,
'Tholomyes': 0.066,
'Fameuil': 0.000,
'Blacheville': 0.000,
'Favourite': 0.000,
'Dahlia': 0.000,
'Zephine': 0.000,
'Fantine': 0.114,
'MmeThenardier': 0.046,
'Thenardier': 0.129,
'Cosette': 0.075,
'Javert': 0.193,
'Fauchelevent': 0.026,
'Bamatabois': 0.080,
'Perpetue': 0.000,
'Simplice': 0.001,
'Scaufflaire': 0.000,
'Woman1': 0.000,
'Judge': 0.000,
'Champmathieu': 0.000,
'Brevet': 0.000,
'Chenildieu': 0.000,
'Cochepaille': 0.000,
'Pontmercy': 0.023,
'Boulatruelle': 0.000,
'Eponine': 0.023,
'Anzelma': 0.000,
'Woman2': 0.000,
'MotherInnocent': 0.000,
'Gribier': 0.000,
'MmeBurgon': 0.026,
'Jondrette': 0.000,
'Gavroche': 0.285,
'Gillenormand': 0.024,
'Magnon': 0.005,
'MlleGillenormand': 0.036,
'MmePontmercy': 0.005,
'MlleVaubois': 0.000,
'LtGillenormand': 0.015,
'Marius': 0.072,
'BaronessT': 0.004,
'Mabeuf': 0.089,
'Enjolras': 0.003,
'Combeferre': 0.000,
'Prouvaire': 0.000,
'Feuilly': 0.004,
'Courfeyrac': 0.001,
'Bahorel': 0.007,
'Bossuet': 0.028,
'Joly': 0.000,
'Grantaire': 0.036,
'MotherPlutarch': 0.000,
'Gueulemer': 0.025,
'Babet': 0.015,
'Claquesous': 0.042,
'Montparnasse': 0.050,
'Toussaint': 0.011,
'Child1': 0.000,
'Child2': 0.000,
'Brujon': 0.002,
'MmeHucheloup': 0.034}
b = nx.betweenness_centrality(G,
weight='weight',
normalized=True)
for n in sorted(G):
assert almost_equal(b[n], b_answer[n], places=3)
def test_ladder_graph(self):
"""Weighted betweenness centrality: Ladder graph"""
G = nx.Graph() # ladder_graph(3)
G.add_edges_from([(0, 1), (0, 2), (1, 3), (2, 3),
(2, 4), (4, 5), (3, 5)])
b_answer = {0: 1.667, 1: 1.667, 2: 6.667,
3: 6.667, 4: 1.667, 5: 1.667}
for b in b_answer:
b_answer[b] /= 2
b = nx.betweenness_centrality(G,
weight='weight',
normalized=False)
for n in sorted(G):
assert almost_equal(b[n], b_answer[n], places=3)
def test_G(self):
"""Weighted betweenness centrality: G"""
G = weighted_G()
b_answer = {0: 2.0, 1: 0.0, 2: 4.0, 3: 3.0, 4: 4.0, 5: 0.0}
b = nx.betweenness_centrality(G,
weight='weight',
normalized=False)
for n in sorted(G):
assert almost_equal(b[n], b_answer[n])
def test_G2(self):
"""Weighted betweenness centrality: G2"""
G = nx.DiGraph()
G.add_weighted_edges_from([('s', 'u', 10), ('s', 'x', 5),
('u', 'v', 1), ('u', 'x', 2),
('v', 'y', 1), ('x', 'u', 3),
('x', 'v', 5), ('x', 'y', 2),
('y', 's', 7), ('y', 'v', 6)])
b_answer = {'y': 5.0, 'x': 5.0, 's': 4.0, 'u': 2.0, 'v': 2.0}
b = nx.betweenness_centrality(G,
weight='weight',
normalized=False)
for n in sorted(G):
assert almost_equal(b[n], b_answer[n])
class TestEdgeBetweennessCentrality(object):
def test_K5(self):
"""Edge betweenness centrality: K5"""
G = nx.complete_graph(5)
b = nx.edge_betweenness_centrality(G, weight=None, normalized=False)
b_answer = dict.fromkeys(G.edges(), 1)
for n in sorted(G.edges()):
assert almost_equal(b[n], b_answer[n])
def test_normalized_K5(self):
"""Edge betweenness centrality: K5"""
G = nx.complete_graph(5)
b = nx.edge_betweenness_centrality(G, weight=None, normalized=True)
b_answer = dict.fromkeys(G.edges(), 1 / 10)
for n in sorted(G.edges()):
assert almost_equal(b[n], b_answer[n])
def test_C4(self):
"""Edge betweenness centrality: C4"""
G = nx.cycle_graph(4)
b = nx.edge_betweenness_centrality(G, weight=None, normalized=True)
b_answer = {(0, 1): 2, (0, 3): 2, (1, 2): 2, (2, 3): 2}
for n in sorted(G.edges()):
assert almost_equal(b[n], b_answer[n] / 6)
def test_P4(self):
"""Edge betweenness centrality: P4"""
G = nx.path_graph(4)
b = nx.edge_betweenness_centrality(G, weight=None, normalized=False)
b_answer = {(0, 1): 3, (1, 2): 4, (2, 3): 3}
for n in sorted(G.edges()):
assert almost_equal(b[n], b_answer[n])
def test_normalized_P4(self):
"""Edge betweenness centrality: P4"""
G = nx.path_graph(4)
b = nx.edge_betweenness_centrality(G, weight=None, normalized=True)
b_answer = {(0, 1): 3, (1, 2): 4, (2, 3): 3}
for n in sorted(G.edges()):
assert almost_equal(b[n], b_answer[n] / 6)
def test_balanced_tree(self):
"""Edge betweenness centrality: balanced tree"""
G = nx.balanced_tree(r=2, h=2)
b = nx.edge_betweenness_centrality(G, weight=None, normalized=False)
b_answer = {(0, 1): 12, (0, 2): 12,
(1, 3): 6, (1, 4): 6, (2, 5): 6, (2, 6): 6}
for n in sorted(G.edges()):
assert almost_equal(b[n], b_answer[n])
class TestWeightedEdgeBetweennessCentrality(object):
def test_K5(self):
"""Edge betweenness centrality: K5"""
G = nx.complete_graph(5)
b = nx.edge_betweenness_centrality(G, weight='weight', normalized=False)
b_answer = dict.fromkeys(G.edges(), 1)
for n in sorted(G.edges()):
assert almost_equal(b[n], b_answer[n])
def test_C4(self):
"""Edge betweenness centrality: C4"""
G = nx.cycle_graph(4)
b = nx.edge_betweenness_centrality(G, weight='weight', normalized=False)
b_answer = {(0, 1): 2, (0, 3): 2, (1, 2): 2, (2, 3): 2}
for n in sorted(G.edges()):
assert almost_equal(b[n], b_answer[n])
def test_P4(self):
"""Edge betweenness centrality: P4"""
G = nx.path_graph(4)
b = nx.edge_betweenness_centrality(G, weight='weight', normalized=False)
b_answer = {(0, 1): 3, (1, 2): 4, (2, 3): 3}
for n in sorted(G.edges()):
assert almost_equal(b[n], b_answer[n])
def test_balanced_tree(self):
"""Edge betweenness centrality: balanced tree"""
G = nx.balanced_tree(r=2, h=2)
b = nx.edge_betweenness_centrality(G, weight='weight', normalized=False)
b_answer = {(0, 1): 12, (0, 2): 12,
(1, 3): 6, (1, 4): 6, (2, 5): 6, (2, 6): 6}
for n in sorted(G.edges()):
assert almost_equal(b[n], b_answer[n])
def test_weighted_graph(self):
eList = [(0, 1, 5), (0, 2, 4), (0, 3, 3),
(0, 4, 2), (1, 2, 4), (1, 3, 1),
(1, 4, 3), (2, 4, 5), (3, 4, 4)]
G = nx.Graph()
G.add_weighted_edges_from(eList)
b = nx.edge_betweenness_centrality(G, weight='weight', normalized=False)
b_answer = {(0, 1): 0.0,
(0, 2): 1.0,
(0, 3): 2.0,
(0, 4): 1.0,
(1, 2): 2.0,
(1, 3): 3.5,
(1, 4): 1.5,
(2, 4): 1.0,
(3, 4): 0.5}
for n in sorted(G.edges()):
assert almost_equal(b[n], b_answer[n])
def test_normalized_weighted_graph(self):
eList = [(0, 1, 5), (0, 2, 4), (0, 3, 3),
(0, 4, 2), (1, 2, 4), (1, 3, 1),
(1, 4, 3), (2, 4, 5), (3, 4, 4)]
G = nx.Graph()
G.add_weighted_edges_from(eList)
b = nx.edge_betweenness_centrality(G, weight='weight', normalized=True)
b_answer = {(0, 1): 0.0,
(0, 2): 1.0,
(0, 3): 2.0,
(0, 4): 1.0,
(1, 2): 2.0,
(1, 3): 3.5,
(1, 4): 1.5,
(2, 4): 1.0,
(3, 4): 0.5}
norm = len(G) * (len(G) - 1) / 2
for n in sorted(G.edges()):
assert almost_equal(b[n], b_answer[n] / norm)