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https://gitlab.com/fabinfra/fabaccess/bffh.git
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DB indexing code
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ddd8add270
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484
Cargo.lock
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484
Cargo.lock
generated
File diff suppressed because it is too large
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@ -36,6 +36,9 @@ async-net = "1.6.1"
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anyhow = "1.0.56"
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toml = "0.5.8"
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# Well-known paths/dirs for e.g. cache
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dirs = "4.0.0"
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# Runtime
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executor = { path = "runtime/executor" }
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@ -48,7 +51,7 @@ clap = { version = "3.1.6", features = ["cargo"] }
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# Internal Databases
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lmdb-rkv = "0.14.0"
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rkyv = "0.7"
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rkyv = { version = "0.7", features = [] }
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ptr_meta = "0.1"
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rkyv_typename = "0.7"
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rkyv_dyn = "0.7"
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@ -1,16 +1,180 @@
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use std::{fs, io};
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use std::collections::HashMap;
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use std::fmt::{Debug, Display, Formatter};
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use std::io::Write;
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use std::path::Path;
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use std::sync::atomic::{AtomicU64, Ordering};
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use std::sync::{Mutex, RwLock};
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use anyhow::Context;
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use lmdb::Environment;
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use rkyv::{Archive, Serialize, Deserialize, AlignedVec, Archived, with::Lock, Infallible, Fallible, ArchiveUnsized, SerializeUnsized};
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use rkyv::de::deserializers::SharedDeserializeMap;
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use rkyv::ser::Serializer;
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use rkyv::ser::serializers::{AlignedSerializer, AllocScratch, AllocScratchError, AllocSerializer, CompositeSerializer, CompositeSerializerError, FallbackScratch, HeapScratch, ScratchTracker, SharedSerializeMap, SharedSerializeMapError};
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use rkyv::with::LockError;
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#[derive(Debug)]
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/// Unique ID Allocator
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///
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/// Helper to allocate numerical ids in shared contexts
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pub struct IdAllocator {
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next_id: AtomicU64,
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pub trait Index {
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type Key: ?Sized;
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fn lookup(&self, key: &Self::Key) -> Option<u64>;
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fn update(&mut self, key: &Self::Key, value: u64);
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}
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impl IdAllocator {
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pub fn new(next_id: u64) -> Self {
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Self { next_id: AtomicU64::new(next_id) }
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pub struct StringIndex {
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inner: HashMap<String, u64>,
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}
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impl Index for StringIndex {
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type Key = str;
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fn lookup(&self, key: &Self::Key) -> Option<u64> {
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self.inner.get(key).map(|v| *v)
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}
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fn update(&mut self, key: &Self::Key, new: u64) {
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let old = self.inner.insert(key.to_string(), new);
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tracing::trace!(key, ?old, new, "updated string index");
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}
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}
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#[derive(Debug, Archive, Serialize, Deserialize)]
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pub struct DbIndexManager<I> {
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name: String,
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// TODO: use locking? Write are serialized anyway
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generation: AtomicU64,
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next_id: AtomicU64,
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#[with(Lock)]
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indices: RwLock<I>,
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}
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type S = CompositeSerializer<AlignedSerializer<AlignedVec>,
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ScratchTracker<FallbackScratch<HeapScratch<1024>, AllocScratch>>, SharedSerializeMap>;
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type SE = CompositeSerializerError<std::convert::Infallible, AllocScratchError, SharedSerializeMapError>;
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#[derive(Debug)]
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pub struct Ser (pub(super) S);
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impl Default for Ser {
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fn default() -> Self {
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Self(CompositeSerializer::new(AlignedSerializer::default(), ScratchTracker::new(FallbackScratch::default()), SharedSerializeMap::default()))
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}
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}
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#[derive(Debug)]
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pub enum SerError {
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Composite(SE),
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Lock(LockError),
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}
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impl Display for SerError {
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fn fmt(&self, f: &mut Formatter<'_>) -> std::fmt::Result {
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match self {
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Self::Composite(e) => Display::fmt(e, f),
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Self::Lock(e) => Display::fmt(e, f),
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}
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}
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}
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impl std::error::Error for SerError {}
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impl From<SE> for SerError {
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fn from(e: SE) -> Self {
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Self::Composite(e)
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}
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}
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impl From<LockError> for SerError {
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fn from(e: LockError) -> Self {
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Self::Lock(e)
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}
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}
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impl Fallible for Ser { type Error = SerError; }
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impl Serializer for Ser {
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fn pos(&self) -> usize {
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self.0.pos()
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}
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fn write(&mut self, bytes: &[u8]) -> Result<(), Self::Error> {
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self.0.write(bytes).map_err(|e| e.into())
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}
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}
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type Ser2 = AllocSerializer<4096>;
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impl<I> DbIndexManager<I> {
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pub fn new(name: String, generation: u64, next_id: u64, indices: I) -> Self {
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tracing::debug!(%name, generation, next_id, "constructing db index");
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Self {
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name,
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generation: AtomicU64::new(generation),
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next_id: AtomicU64::new(next_id),
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indices: RwLock::new(indices),
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}
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}
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}
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impl<I> DbIndexManager<I>
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where I: 'static + Archive + Serialize<Ser>,
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<I as Archive>::Archived: Deserialize<I, SharedDeserializeMap>,
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{
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pub fn store(&self, path: impl AsRef<Path>) -> anyhow::Result<usize> {
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let path = path.as_ref();
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let span = tracing::debug_span!("store",
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name=%self.name, path=%path.display(),
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"storing database index"
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);
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let _guard = span.enter();
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tracing::trace!("opening db index file");
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let mut fd = fs::File::create(path)
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.with_context(|| format!("failed to open database index file {}", path.display()))?;
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tracing::trace!(?fd, "opened db index file");
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let mut serializer = Ser::default();
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tracing::trace!(?serializer, "serializing db index");
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let root = serializer.serialize_value(self).context("serializing database index failed")?;
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let (s, c, h) = serializer.0.into_components();
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let v = s.into_inner();
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tracing::trace!(%root,
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len = v.len(),
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max_bytes_allocated = c.max_bytes_allocated(),
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max_allocations = c.max_allocations(),
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max_alignment = c.max_alignment(),
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min_buffer_size = c.min_buffer_size(),
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min_buffer_size_max_error = c.min_buffer_size_max_error(),
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"serialized db index");
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let () = fd.write_all(v.as_slice())
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.with_context(|| format!("failed to write {} bytes to database index file at {}", v.len(), path.display()))?;
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Ok(v.len())
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}
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pub fn load<'a>(path: impl AsRef<Path>) -> anyhow::Result<Self> {
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let path = path.as_ref();
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let span = tracing::debug_span!("load",
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path=%path.display(),
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"loading database index"
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);
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let _guard = span.enter();
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tracing::trace!("reading db index file");
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let data = fs::read(path).with_context(|| format!("failed to read database index file at {}", path.display()))?;
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tracing::trace!(len=data.len(), "read db index file");
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let res = unsafe {
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let maybe_this: &Archived<Self> = rkyv::archived_root::<Self>(&data[..]);
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// TODO: validate `maybe_this`
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maybe_this
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};
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tracing::trace!("loaded db index from file");
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let mut deser = SharedDeserializeMap::default();
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let this: Self = Deserialize::<Self, _>::deserialize(res, &mut deser)?;
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tracing::trace!(generation=this.generation.load(Ordering::Relaxed),
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"deserialized db index from file");
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Ok(this)
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}
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/// Return a new unused ID using an atomic fetch-add
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@ -18,13 +182,12 @@ impl IdAllocator {
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self.next_id.fetch_add(1, Ordering::Release)
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}
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}
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impl<I: Index> DbIndexManager<I> {
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pub fn lookup(&self, key: &I::Key) -> Option<u64> {
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self.indices.read().unwrap().lookup(key)
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}
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pub struct IdSegments {
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segments: Vec<(u64, u64)>,
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}
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impl IdSegments {
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pub fn new(segments: Vec<(u64, u64)>) -> Self {
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Self { segments }
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pub fn update(&self, key: &I::Key, value: u64) {
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self.indices.write().unwrap().update(key, value)
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}
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}
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@ -44,6 +44,7 @@ use std::sync::Arc;
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use std::path::Path;
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use crate::users::db::{User, UserDB};
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use std::collections::HashMap;
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use std::fmt::{Display, Formatter};
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use rkyv::Infallible;
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use crate::resources::state::{State, db::StateDB};
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use std::iter::FromIterator;
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@ -58,6 +59,15 @@ pub enum DBError {
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LMDB(lmdb::Error),
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RKYV(<AllocSerializer<1024> as Fallible>::Error),
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}
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impl Display for DBError {
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fn fmt(&self, f: &mut Formatter<'_>) -> std::fmt::Result {
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match self {
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Self::LMDB(e) => write!(f, "LMDB error: {}", e),
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Self::RKYV(e) => write!(f, "rkyv error: {}", e),
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}
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}
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}
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impl std::error::Error for DBError { }
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pub(crate) type Result<T> = std::result::Result<T, DBError>;
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