Merge branch 'master' into sismics_prod

# Conflicts:
#	Dockerfile

.github/FUNDING.yml

@@ -0,0 +1,3 @@
+# These are supported funding model platforms
+
+github: [jendib]

.github/workflows/build-deploy.yml

@@ -0,0 +1,84 @@
+name: Maven CI/CD
+
+on:
+  push:
+    branches: [master]
+    tags: [v*]
+  workflow_dispatch:
+
+jobs:
+  build_and_publish:
+    runs-on: ubuntu-latest
+
+    steps:
+      - uses: actions/checkout@v2
+      - name: Set up JDK 11
+        uses: actions/setup-java@v2
+        with:
+          java-version: "11"
+          distribution: "temurin"
+          cache: maven
+      - name: Install test dependencies
+        run: sudo apt-get update && sudo apt-get -y -q --no-install-recommends install ffmpeg mediainfo tesseract-ocr tesseract-ocr-deu
+      - name: Build with Maven
+        run: mvn -Pprod clean install
+      - name: Upload war artifact
+        uses: actions/upload-artifact@v2
+        with:
+          name: docs-web-ci.war
+          path: docs-web/target/docs*.war
+
+  build_docker_image:
+    name: Publish to Docker Hub
+    runs-on: ubuntu-latest
+    needs: [build_and_publish]
+
+    steps:
+      - 
+        name: Checkout
+        uses: actions/checkout@v2
+      - 
+        name: Download war artifact
+        uses: actions/download-artifact@v2
+        with:
+          name: docs-web-ci.war
+          path: docs-web/target
+      - 
+        name: Setup up Docker Buildx
+        uses: docker/setup-buildx-action@v1
+      - 
+        name: Login to DockerHub
+        if: github.event_name != 'pull_request'
+        uses: docker/login-action@v1
+        with:
+          username: ${{ secrets.DOCKERHUB_USERNAME }}
+          password: ${{ secrets.DOCKERHUB_TOKEN }}
+      - 
+        name: Populate Docker metadata
+        id: metadata
+        uses: docker/metadata-action@v3
+        with:
+          images: sismics/docs
+          flavor: |
+            latest=false
+          tags: |
+            type=ref,event=tag
+            type=raw,value=latest,enable=${{ github.ref_type != 'tag' }}
+          labels: |
+            org.opencontainers.image.title = Teedy
+            org.opencontainers.image.description = Teedy is an open source, lightweight document management system for individuals and businesses.
+            org.opencontainers.image.created = ${{ github.event_created_at }}
+            org.opencontainers.image.author = Sismics
+            org.opencontainers.image.url = https://teedy.io/
+            org.opencontainers.image.vendor = Sismics
+            org.opencontainers.image.license = GPLv2
+            org.opencontainers.image.version = ${{ github.event_head_commit.id }}
+      - 
+        name: Build and push
+        id: docker_build
+        uses: docker/build-push-action@v2
+        with:
+          context: .
+          push: ${{ github.event_name != 'pull_request' }}
+          tags: ${{ steps.metadata.outputs.tags }}
+          labels: ${{ steps.metadata.outputs.labels }}

.gitignore

@@ -11,6 +11,11 @@
 *.iml
 node_modules
 import_test
-docs-importer-linux
-docs-importer-macos
-docs-importer-win.exe
+teedy-importer-linux
+teedy-importer-macos
+teedy-importer-win.exe
+docs/*
+!docs/.gitkeep
+
+#macos
+.DS_Store

.travis.yml

@@ -1,26 +0,0 @@
-sudo: required
-dist: trusty
-language: java
-before_install:
-  - sudo add-apt-repository -y ppa:mc3man/trusty-media
-  - sudo apt-get -qq update
-  - sudo apt-get -y -q install ffmpeg mediainfo tesseract-ocr tesseract-ocr-fra tesseract-ocr-ita tesseract-ocr-kor tesseract-ocr-rus tesseract-ocr-ukr tesseract-ocr-spa tesseract-ocr-ara tesseract-ocr-hin tesseract-ocr-deu tesseract-ocr-pol tesseract-ocr-jpn tesseract-ocr-por tesseract-ocr-tha tesseract-ocr-jpn tesseract-ocr-chi-sim tesseract-ocr-chi-tra tesseract-ocr-nld tesseract-ocr-tur
-  - sudo apt-get -y -q install haveged && sudo service haveged start
-after_success:
-  - |
-    if [ "$TRAVIS_PULL_REQUEST" == "false" ]; then
-      mvn -Pprod -DskipTests clean install
-      docker login -u $DOCKER_USER -p $DOCKER_PASS
-      export REPO=sismics/docs
-      export TAG=`if [ "$TRAVIS_BRANCH" == "master" ]; then echo "latest"; else echo $TRAVIS_BRANCH ; fi`
-      docker build -f Dockerfile -t $REPO:$COMMIT .
-      docker tag $REPO:$COMMIT $REPO:$TAG
-      docker tag $REPO:$COMMIT $REPO:travis-$TRAVIS_BUILD_NUMBER
-      docker push $REPO
-    fi
-env:
-  global:
-  - secure: LRGpjWORb0qy6VuypZjTAfA8uRHlFUMTwb77cenS9PPRBxuSnctC531asS9Xg3DqC5nsRxBBprgfCKotn5S8nBSD1ceHh84NASyzLSBft3xSMbg7f/2i7MQ+pGVwLncusBU6E/drnMFwZBleo+9M8Tf96axY5zuUp90MUTpSgt0=
-  - secure: bCDDR6+I7PmSkuTYZv1HF/z98ANX/SFEESUCqxVmV5Gs0zFC0vQXaPJQ2xaJNRop1HZBFMZLeMMPleb0iOs985smpvK2F6Rbop9Tu+Vyo0uKqv9tbZ7F8Nfgnv9suHKZlL84FNeUQZJX6vsFIYPEJ/r7K5P/M0PdUy++fEwxEhU=
-  - secure: ewXnzbkgCIHpDWtaWGMa1OYZJ/ki99zcIl4jcDPIC0eB3njX/WgfcC6i0Ke9mLqDqwXarWJ6helm22sNh+xtQiz6isfBtBX+novfRt9AANrBe3koCMUemMDy7oh5VflBaFNP0DVb8LSCnwf6dx6ZB5E9EB8knvk40quc/cXpGjY=
-  - COMMIT=${TRAVIS_COMMIT::8}

Dockerfile

@@ -1,11 +1,48 @@
-FROM sismics/ubuntu-jetty:9.4.12-2
-MAINTAINER b.gamard@sismics.com
+FROM sismics/ubuntu-jetty:11.0.14
+LABEL maintainer="b.gamard@sismics.com"
 
-RUN apt-get update && apt-get -y -q install ffmpeg mediainfo tesseract-ocr tesseract-ocr-fra tesseract-ocr-ita tesseract-ocr-kor tesseract-ocr-rus tesseract-ocr-ukr tesseract-ocr-spa tesseract-ocr-ara tesseract-ocr-hin tesseract-ocr-deu tesseract-ocr-pol tesseract-ocr-jpn tesseract-ocr-por tesseract-ocr-tha tesseract-ocr-jpn tesseract-ocr-chi-sim tesseract-ocr-chi-tra tesseract-ocr-nld tesseract-ocr-tur && \
-    apt-get clean && rm -rf /var/lib/apt/lists/*
+RUN apt-get update && \
+    apt-get -y -q --no-install-recommends install \
+    ffmpeg \
+    mediainfo \
+    tesseract-ocr \
+    tesseract-ocr-ara \
+    tesseract-ocr-ces \
+    tesseract-ocr-chi-sim \
+    tesseract-ocr-chi-tra \
+    tesseract-ocr-dan \
+    tesseract-ocr-deu \
+    tesseract-ocr-fin \
+    tesseract-ocr-fra \
+    tesseract-ocr-heb \
+    tesseract-ocr-hin \
+    tesseract-ocr-hun \
+    tesseract-ocr-ita \
+    tesseract-ocr-jpn \
+    tesseract-ocr-kor \
+    tesseract-ocr-lav \
+    tesseract-ocr-nld \
+    tesseract-ocr-nor \
+    tesseract-ocr-pol \
+    tesseract-ocr-por \
+    tesseract-ocr-rus \
+    tesseract-ocr-spa \
+    tesseract-ocr-swe \
+    tesseract-ocr-tha \
+    tesseract-ocr-tur \
+    tesseract-ocr-ukr \
+    tesseract-ocr-vie \
+    tesseract-ocr-sqi && \
+    apt-get clean && rm -rf /var/lib/apt/lists/* && \
+    mkdir /app && \
+    cd /app && \
+    java -jar /opt/jetty/start.jar --add-modules=server,http,webapp,deploy
 
-# Remove the embedded javax.mail jar from Jetty
-RUN rm -f /opt/jetty/lib/mail/javax.mail.glassfish-*.jar
+ADD docs.xml /app/webapps/docs.xml
+ADD docs-web/target/docs-web-*.war /app/webapps/docs.war
+
+ENV JAVA_OPTIONS -Xmx1g
+
+WORKDIR /app
+CMD ["java", "-jar", "/opt/jetty/start.jar"]
 
-ADD docs.xml /opt/jetty/webapps/docs.xml
-ADD docs-web/target/docs-web-*.war /opt/jetty/webapps/docs.war

README.md

@@ -2,40 +2,38 @@
   <img src="https://teedy.io/img/github-title.png" alt="Teedy" width=500 />
 </h3>
 
-[![Twitter: @teedyio](https://img.shields.io/badge/contact-@teedyio-blue.svg?style=flat)](https://twitter.com/teedyio)
 [![License: GPL v2](https://img.shields.io/badge/License-GPL%20v2-blue.svg)](https://www.gnu.org/licenses/old-licenses/gpl-2.0.en.html)
-[![Build Status](https://secure.travis-ci.org/sismics/docs.png)](http://travis-ci.org/sismics/docs)
+[![Maven CI/CD](https://github.com/sismics/docs/actions/workflows/build-deploy.yml/badge.svg)](https://github.com/sismics/docs/actions/workflows/build-deploy.yml)
 
 Teedy is an open source, lightweight document management system for individuals and businesses.
 
-**Discuss it on [Product Hunt](https://www.producthunt.com/posts/sismics-docs) 🦄**
-
 <hr />
 <h2 align="center">
-  ✨ Sismics Docs is now called Teedy! You can still find our cloud and support offer on <a href="https://teedy.io">teedy.io</a> ✨
+  ✨ <a href="https://github.com/users/jendib/sponsorship">Sponsor this project if you use and appreciate it!</a> ✨
 </h2>
 <hr />
 
 ![New!](https://teedy.io/img/laptop-demo.png?20180301)
 
-Demo
-----
+# Demo
 
 A demo is available at [demo.teedy.io](https://demo.teedy.io)
+
 - Guest login is enabled with read access on all documents
 - "admin" login with "admin" password
 - "demo" login with "password" password 
 
-Features
---------
+# Features
 
 - Responsive user interface
 - Optical character recognition
+- LDAP authentication ![New!](https://www.sismics.com/public/img/new.png)
 - Support image, PDF, ODT, DOCX, PPTX files
 - Video file support
 - Flexible search engine with suggestions and highlighting
 - Full text search in all supported files
 - All [Dublin Core](http://dublincore.org/) metadata
+- Custom user-defined metadata ![New!](https://www.sismics.com/public/img/new.png)
 - Workflow system ![New!](https://www.sismics.com/public/img/new.png)
 - 256-bit AES encryption of stored files
 - File versioning ![New!](https://www.sismics.com/public/img/new.png)
@@ -55,86 +53,192 @@ Features
 - [Bulk files importer](https://github.com/sismics/docs/tree/master/docs-importer) (single or scan mode)
 - Tested to one million documents
 
-Install with Docker
--------------------
+# Install with Docker
+
+A preconfigured Docker image is available, including OCR and media conversion tools, listening on port 8080. If no PostgreSQL config is provided, the database is an embedded H2 database. The H2 embedded database should only be used for testing. For production usage use the provided PostgreSQL configuration (check the Docker Compose example)
 
-From a Docker host, run this command to download and install Teedy. The server will run on <http://[your-docker-host-ip]:8100>.
 **The default admin password is "admin". Don't forget to change it before going to production.**
 
-    docker run --rm --name teedy_latest -d -e DOCS_BASE_URL='http://[your-docker-host-ip]:8100' -p 8100:8080 -v teedy_latest:/data sismics/docs:latest
-  <img src="http://www.newdesignfile.com/postpic/2011/01/green-info-icon_206509.png" width="16px" height="16px">  **Note:** You will need to change [your-docker-host-ip] with the IP address or FQDN of your docker host e.g.
-  
-  FQDN: http://docs.mycompany.com  
-  IP: http://192.168.100.10
+- Master branch, can be unstable. Not recommended for production use: `sismics/docs:latest`
+- Latest stable version: `sismics/docs:v1.11`
 
-Manual installation
--------------------
+The data directory is `/data`. Don't forget to mount a volume on it.
 
-#### Requirements
-- Java 8 with the [Java Cryptography Extension](http://www.oracle.com/technetwork/java/javase/downloads/jce-7-download-432124.html)
-- Tesseract 3 or 4 for OCR
+To build external URL, the server is expecting a `DOCS_BASE_URL` environment variable (for example https://teedy.mycompany.com)
+
+## Available environment variables
+
+- General
+  - `DOCS_BASE_URL`: The base url used by the application. Generated url's will be using this as base.
+  - `DOCS_GLOBAL_QUOTA`: Defines the default quota applying to all users.
+  - `DOCS_BCRYPT_WORK`: Defines the work factor which is used for password hashing. The default is `10`. This value may be `4...31` including `4` and `31`. The specified value will be used for all new users and users changing their password. Be aware that setting this factor to high can heavily impact login and user creation performance.
+
+- Admin
+  - `DOCS_ADMIN_EMAIL_INIT`: Defines the e-mail-address the admin user should have upon initialization.
+  - `DOCS_ADMIN_PASSWORD_INIT`: Defines the password the admin user should have upon initialization.  Needs to be a bcrypt hash.  **Be aware that `$` within the hash have to be escaped with a second `$`.**
+
+- Database
+  - `DATABASE_URL`: The jdbc connection string to be used by `hibernate`.
+  - `DATABASE_USER`: The user which should be used for the database connection.
+  - `DATABASE_PASSWORD`: The password to be used for the database connection.
+
+- Language
+  - `DOCS_DEFAULT_LANGUAGE`: The language which will be used as default. Currently supported values are:
+    - `eng`, `fra`, `ita`, `deu`, `spa`, `por`, `pol`, `rus`, `ukr`, `ara`, `hin`, `chi_sim`, `chi_tra`, `jpn`, `tha`, `kor`, `nld`, `tur`, `heb`, `hun`, `fin`, `swe`, `lav`, `dan`
+
+- E-Mail
+  - `DOCS_SMTP_HOSTNAME`: Hostname of the SMTP-Server to be used by Teedy.
+  - `DOCS_SMTP_PORT`: The port which should be used.
+  - `DOCS_SMTP_USERNAME`: The username to be used.
+  - `DOCS_SMTP_PASSWORD`: The password to be used.
+
+## Examples
+
+In the following examples some passwords are exposed in cleartext. This was done in order to keep the examples simple. We strongly encourage you to use variables with an `.env` file or other means to securely store your passwords.
+
+
+### Default, using PostgreSQL
+
+```yaml
+version: '3'
+services:
+# Teedy Application
+  teedy-server:
+    image: sismics/docs:v1.11
+    restart: unless-stopped
+    ports:
+      # Map internal port to host
+      - 8080:8080
+    environment:
+      # Base url to be used
+      DOCS_BASE_URL: "https://docs.example.com"
+      # Set the admin email
+      DOCS_ADMIN_EMAIL_INIT: "admin@example.com"
+      # Set the admin password (in this example: "superSecure")
+      DOCS_ADMIN_PASSWORD_INIT: "$$2a$$05$$PcMNUbJvsk7QHFSfEIDaIOjk1VI9/E7IPjTKx.jkjPxkx2EOKSoPS"
+      # Setup the database connection. "teedy-db" is the hostname
+      # and "teedy" is the name of the database the application
+      # will connect to.
+      DATABASE_URL: "jdbc:postgresql://teedy-db:5432/teedy"
+      DATABASE_USER: "teedy_db_user"
+      DATABASE_PASSWORD: "teedy_db_password"
+    volumes:
+      - ./docs/data:/data
+    networks:
+      - docker-internal
+      - internet
+    depends_on:
+      - teedy-db
+
+# DB for Teedy
+  teedy-db:
+    image: postgres:13.1-alpine
+    restart: unless-stopped
+    expose:
+      - 5432
+    environment:
+      POSTGRES_USER: "teedy_db_user"
+      POSTGRES_PASSWORD: "teedy_db_password"
+      POSTGRES_DB: "teedy"
+    volumes:
+      - ./docs/db:/var/lib/postgresql/data
+    networks:
+      - docker-internal
+
+networks:
+  # Network without internet access. The db does not need
+  # access to the host network.
+  docker-internal:
+    driver: bridge
+    internal: true
+  internet:
+    driver: bridge
+```
+
+### Using the internal database (only for testing)
+
+```yaml
+version: '3'
+services:
+# Teedy Application
+  teedy-server:
+    image: sismics/docs:v1.11
+    restart: unless-stopped
+    ports:
+      # Map internal port to host
+      - 8080:8080
+    environment:
+      # Base url to be used
+      DOCS_BASE_URL: "https://docs.example.com"
+      # Set the admin email
+      DOCS_ADMIN_EMAIL_INIT: "admin@example.com"
+      # Set the admin password (in this example: "superSecure")
+      DOCS_ADMIN_PASSWORD_INIT: "$$2a$$05$$PcMNUbJvsk7QHFSfEIDaIOjk1VI9/E7IPjTKx.jkjPxkx2EOKSoPS"
+    volumes:
+      - ./docs/data:/data
+```
+
+# Manual installation
+
+## Requirements
+
+- Java 11
+- Tesseract 4 for OCR
 - ffmpeg for video thumbnails
 - mediainfo for video metadata extraction
 - A webapp server like [Jetty](http://eclipse.org/jetty/) or [Tomcat](http://tomcat.apache.org/)
 
-#### Download
+## Download
+
 The latest release is downloadable here: <https://github.com/sismics/docs/releases> in WAR format. 
 **The default admin password is "admin". Don't forget to change it before going to production.**
 
-How to build Teedy from the sources
-----------------------------------
+## How to build Teedy from the sources
 
-Prerequisites: JDK 8 with JCE, Maven 3, Tesseract 3 or 4
+Prerequisites: JDK 11, Maven 3, NPM, Grunt, Tesseract 4
 
 Teedy is organized in several Maven modules:
 
-  - docs-core
-  - docs-web
-  - docs-web-common
+- docs-core
+- docs-web
+- docs-web-common
 
 First off, clone the repository: `git clone git://github.com/sismics/docs.git`
 or download the sources from GitHub.
 
-#### Launch the build
+### Launch the build
 
 From the root directory:
 
-    mvn clean -DskipTests install
+```console
+mvn clean -DskipTests install
+```
 
-#### Run a stand-alone version
+### Run a stand-alone version
 
 From the `docs-web` directory:
 
-    mvn jetty:run
+```console
+mvn jetty:run
+```
 
-#### Build a .war to deploy to your servlet container
+### Build a .war to deploy to your servlet container
 
 From the `docs-web` directory:
 
-    mvn -Pprod -DskipTests clean install
+```console
+mvn -Pprod -DskipTests clean install
+```
 
 You will get your deployable WAR in the `docs-web/target` directory.
 
-Contributing
-------------
+# Contributing
 
 All contributions are more than welcomed. Contributions may close an issue, fix a bug (reported or not reported), improve the existing code, add new feature, and so on.
 
 The `master` branch is the default and base branch for the project. It is used for development and all Pull Requests should go there.
 
-
-Community
----------
-
-Get updates on Teedy's development and chat with the project maintainers:
-
-- Follow [@teedyio on Twitter](https://twitter.com/teedyio)
-- Read and subscribe to [The Official Teedy Blog](https://blog.teedy.io/)
-- Check the [Official Website](https://teedy.io)
-- Join us [on Facebook](https://www.facebook.com/teedyio)
-
-License
--------
+# License
 
 Teedy is released under the terms of the GPL license. See `COPYING` for more
 information or see <http://opensource.org/licenses/GPL-2.0>.

docker-compose.yml

@@ -0,0 +1,18 @@
+version: '3'
+services:
+# Teedy Application
+  teedy-server:
+    image: sismics/docs:v1.10
+    restart: unless-stopped
+    ports:
+      # Map internal port to host
+      - 8080:8080
+    environment:
+      # Base url to be used
+      DOCS_BASE_URL: "https://docs.example.com"
+      # Set the admin email
+      DOCS_ADMIN_EMAIL_INIT: "admin@example.com"
+      # Set the admin password (in this example: "superSecure")
+      DOCS_ADMIN_PASSWORD_INIT: "$$2a$$05$$PcMNUbJvsk7QHFSfEIDaIOjk1VI9/E7IPjTKx.jkjPxkx2EOKSoPS"
+    volumes:
+      - ./docs/data:/data

docs-android/app/build.gradle

@@ -4,7 +4,7 @@ buildscript {
         google()
     }
     dependencies {
-        classpath 'com.android.tools.build:gradle:3.3.0'
+        classpath 'com.android.tools.build:gradle:3.4.0'
     }
 }
 apply plugin: 'com.android.application'

docs-android/app/src/main/java/com/sismics/docs/adapter/LanguageAdapter.java

@@ -34,6 +34,7 @@ public class LanguageAdapter extends BaseAdapter {
         languageList.add(new Language("fra", R.string.language_french, R.drawable.fra));
         languageList.add(new Language("eng", R.string.language_english, R.drawable.eng));
         languageList.add(new Language("deu", R.string.language_german, R.drawable.deu));
+        languageList.add(new Language("pol", R.string.language_polish, R.drawable.pol));
     }
 
     @Override

docs-android/app/src/main/java/com/sismics/docs/util/SearchQueryBuilder.java

@@ -39,7 +39,9 @@ public class SearchQueryBuilder {
      */
     public SearchQueryBuilder simpleSearch(String simpleSearch) {
         if (isValid(simpleSearch)) {
-            query.append(SEARCH_SEPARATOR).append(simpleSearch);
+            query.append(SEARCH_SEPARATOR)
+                    .append("simple:")
+                    .append(simpleSearch);
         }
         return this;
     }

docs-android/app/src/main/res/values-pl/strings.xml

@@ -0,0 +1,164 @@
+<?xml version="1.0" encoding="utf-8"?>
+<resources>
+
+    <!-- Validation -->
+    <string name="validate_error_email">Nieprawidłowy email</string>
+    <string name="validate_error_length_min">Za krótki (min. %d)</string>
+    <string name="validate_error_length_max">Za długi (max. %d)</string>
+    <string name="validate_error_required">Wymagany</string>
+    <string name="validate_error_alphanumeric">Tylko litery i cyfry</string>
+
+    <!-- App -->
+    <string name="app_name" translatable="false">Teedy</string>
+    <string name="drawer_open">Otwórz szufladę nawigacji</string>
+    <string name="drawer_close">Zamknij szufladę nawigacji</string>
+    <string name="login_explain"><![CDATA[Aby rozpocząć, musisz pobrać i zainstalować serwer Teedy na <a href="https://github.com/sismics/docs">github.com/sismics/docs</a> i poniżej wprowadzić adres]]></string>
+    <string name="server">Serwer</string>
+    <string name="username">Użytkownik</string>
+    <string name="password">Hasło</string>
+    <string name="login">Zaloguj</string>
+    <string name="ok">OK</string>
+    <string name="cancel">Anuluj</string>
+    <string name="login_fail_title">Błąd logowania</string>
+    <string name="login_fail">Nieprawidłowa nazwa użytkownika lub hasło</string>
+    <string name="network_error_title">Błąd sieci</string>
+    <string name="network_error">Błąd sieci, sprawdź połączenie z interneterm oraz adres URL serwera</string>
+    <string name="invalid_url_title">Nieprawidłowy adres URL</string>
+    <string name="invalid_url">Sprawdź adres URL serwera i spróbuj ponownie</string>
+    <string name="crash_toast_text">Wystąpiła awaria, wysłano raport w celu rozwiązania tego problemu</string>
+    <string name="created_date">Data utworzenia</string>
+    <string name="download_file">Pobierz bieżący plik</string>
+    <string name="download_document">Pobierz</string>
+    <string name="action_search">Znadź dokumenty</string>
+    <string name="all_documents">Wszystkie dokumenty</string>
+    <string name="shared_documents">Udostępnione dokumenty</string>
+    <string name="all_tags">Wszystkie etykiety</string>
+    <string name="no_tags">Brak etykiet</string>
+    <string name="error_loading_tags">Błąd ładowania etykiet</string>
+    <string name="no_documents">Brak dokumentów</string>
+    <string name="error_loading_documents">Błąd ładowania dokumentów</string>
+    <string name="no_files">Brak plików</string>
+    <string name="error_loading_files">Błąd ładowania plików</string>
+    <string name="new_document">Nowy dokument</string>
+    <string name="share">Udostępnij</string>
+    <string name="close">Zamknij</string>
+    <string name="add">Dodaj</string>
+    <string name="add_share_hint">Nazwa udostępnienia (opcjonalnie)</string>
+    <string name="document_not_shared">Ten dokument nie jest obecnie udostępniony</string>
+    <string name="delete_share">Usuń udostępnienie</string>
+    <string name="send_share">Wyślij link udostępnienia</string>
+    <string name="error_loading_shares">Błąd ładowania udostępnień</string>
+    <string name="error_adding_share">Błąd dodawania udostępnienia</string>
+    <string name="share_default_name">Udostępnij link</string>
+    <string name="error_deleting_share">Błąd usuwania udostępnienia</string>
+    <string name="send_share_to">Wyślij link udostępnienia do</string>
+    <string name="upload_file">dodaj plik</string>
+    <string name="upload_from">Przeslij plik z</string>
+    <string name="settings">ustawienia</string>
+    <string name="logout">Wyloguj</string>
+    <string name="version">Wersja</string>
+    <string name="build">Kompilacja</string>
+    <string name="pref_advanced_category">Ustawienia zaawansowane</string>
+    <string name="pref_about_category">O programie</string>
+    <string name="pref_github">GitHub</string>
+    <string name="pref_issue">Zgłoś błąd</string>
+    <string name="pref_clear_cache_title">Wyczyść cache</string>
+    <string name="pref_clear_cache_summary">Wyczyść podręczne pliki</string>
+    <string name="pref_clear_cache_success">Cache wyczyszczony</string>
+    <string name="pref_clear_history_title">Wyczyść historię wyszukiwania</string>
+    <string name="pref_clear_history_summary">Opróżnij ostatnie sugestie wyszukiwania</string>
+    <string name="pref_clear_history_success">Historia wyszukiwania wyczyszczona</string>
+    <string name="pref_cache_size">Rozmiar cache</string>
+    <string name="language_french" translatable="false">Francuski</string>
+    <string name="language_english" translatable="false">Angielski</string>
+    <string name="language_german" translatable="false">Niemiecki</string>
+    <string name="language_polish" translatable="false">Polski</string>
+    <string name="save">Zapisz</string>
+    <string name="edit_document">Edytuj</string>
+    <string name="error_editing_document">Błąd sieci, spróbuj ponownie</string>
+    <string name="please_wait">Proszę czekać</string>
+    <string name="document_editing_message">Wysyłam twoje dane</string>
+    <string name="delete_document">Usuń</string>
+    <string name="delete_document_title">Usuń dokument</string>
+    <string name="delete_document_message">Naprawdę chcesz usunąć dokument i powiązane z nim pliki?</string>
+    <string name="document_delete_failure">Błąd sieci w czasie usuwania tego dokumentu</string>
+    <string name="document_deleting_message">Usuwanie dokumentu</string>
+    <string name="delete_file_title">Usuń plik</string>
+    <string name="delete_file_message">Naprawdę chcesz usunąć ten plik?</string>
+    <string name="file_delete_failure">Błąd sieci w czasie usuwania bieżącego pliku</string>
+    <string name="file_deleting_message">Usuwanie pliku</string>
+    <string name="error_reading_file">Błąd podczas odczytu pliku</string>
+    <string name="upload_notification_title">Teedy</string>
+    <string name="upload_notification_message">Przesyłanie nowego pliku do dokumentu</string>
+    <string name="upload_notification_error">Błąd przsyłania nowego pliku</string>
+    <string name="delete_file">Usuń bieżący plik</string>
+    <string name="advanced_search">Zaawansowane wyszukiwanie</string>
+    <string name="search">Znajdź</string>
+    <string name="add_tags">Dodaj eytkiety</string>
+    <string name="creation_date">Data utworzenia</string>
+    <string name="description">Opis</string>
+    <string name="title">Tytuł</string>
+    <string name="simple_search">Proste wyszukiwanie</string>
+    <string name="fulltext_search">Wyszukiwanie pełnotekstowe</string>
+    <string name="creator">Autor</string>
+    <string name="after_date">Po dacie</string>
+    <string name="before_date">Przed datą</string>
+    <string name="search_tags">Znajdź etykiety</string>
+    <string name="all_languages">Wszystkie języki</string>
+    <string name="toggle_informations">Przełącz informacje</string>
+    <string name="who_can_access">Kto ma dostęp</string>
+    <string name="comments">Komentarze</string>
+    <string name="no_comments">Brak komentarzy</string>
+    <string name="error_loading_comments">Błąd ładowania komentarzy</string>
+    <string name="send">Wyślij</string>
+    <string name="add_comment">Dodaj komentarz</string>
+    <string name="comment_add_failure">Błąd dodawania komentarza</string>
+    <string name="adding_comment">Dodawanie komentarza</string>
+    <string name="comment_delete">Usuń komentarz</string>
+    <string name="deleting_comment">Usuwanie komentarza</string>
+    <string name="error_deleting_comment">Błąd usuwania komentarza</string>
+    <string name="export_pdf">PDF</string>
+    <string name="download">Pobierz</string>
+    <string name="margin">Margines</string>
+    <string name="fit_image_to_page">Dostosuj obraz do strony</string>
+    <string name="export_comments">Eksport komentarzy</string>
+    <string name="export_metadata">Eksport metadanych</string>
+    <string name="mm">mm</string>
+    <string name="download_file_title">Eksport plików Teedy</string>
+    <string name="download_document_title">Eksport dokumentu Teedy</string>
+    <string name="download_pdf_title">Eksport Teedy jako PDF</string>
+    <string name="latest_activity">Ostatnie aktywności</string>
+    <string name="activity">Aktywności</string>
+    <string name="email">E-mail</string>
+    <string name="storage_quota">Limit magazynu</string>
+    <string name="storage_display">%1$d/%2$d MB</string>
+    <string name="validation_code">Kod weryfikujący</string>
+    <string name="shared">Udostępnienie</string>
+    <string name="language">Język</string>
+    <string name="coverage">Zakres</string>
+    <string name="type">Rodzaj</string>
+    <string name="source">Źródło</string>
+    <string name="format">Format</string>
+    <string name="publisher">Udostępniający</string>
+    <string name="identifier">Identifikator</string>
+    <string name="subject">temat</string>
+    <string name="rights">Prawa</string>
+    <string name="contributors">Współtwórcy</string>
+    <string name="relations">Powiązania</string>
+
+    <!-- Audit log -->
+    <string name="auditlog_Acl">ACL</string>
+    <string name="auditlog_Comment">Komentarz</string>
+    <string name="auditlog_Document">Dokument</string>
+    <string name="auditlog_File">Plik</string>
+    <string name="auditlog_Group">Grupa</string>
+    <string name="auditlog_Route">Przepływ</string>
+    <string name="auditlog_RouteModel">Model przepływu</string>
+    <string name="auditlog_Tag">Etykieta</string>
+    <string name="auditlog_User">Użytkownik</string>
+    <string name="auditlog_Webhook">Webhook</string>
+    <string name="auditlog_created">utworzony</string>
+    <string name="auditlog_updated">zaktualizowany</string>
+    <string name="auditlog_deleted">usunięty</string>
+
+</resources>

docs-android/app/src/main/res/values/strings.xml

@@ -72,6 +72,7 @@
     <string name="language_french" translatable="false">Français</string>
     <string name="language_english" translatable="false">English</string>
     <string name="language_german" translatable="false">Deutsch</string>
+    <string name="language_polish" translatable="false">Polski</string>
     <string name="save">Save</string>
     <string name="edit_document">Edit</string>
     <string name="error_editing_document">Network error, please try again</string>

docs-android/gradle/wrapper/gradle-wrapper.properties

@@ -1,6 +1,6 @@
-#Wed Jan 30 16:31:31 CET 2019
+#Tue May 07 11:49:13 CEST 2019
 distributionBase=GRADLE_USER_HOME
 distributionPath=wrapper/dists
 zipStoreBase=GRADLE_USER_HOME
 zipStorePath=wrapper/dists
-distributionUrl=https\://services.gradle.org/distributions/gradle-4.10.1-all.zip
+distributionUrl=https\://services.gradle.org/distributions/gradle-5.1.1-all.zip

docs-core/pom.xml

@@ -5,8 +5,8 @@
   <parent>
     <groupId>com.sismics.docs</groupId>
     <artifactId>docs-parent</artifactId>
-    <version>1.6-SNAPSHOT</version>
-    <relativePath>..</relativePath>
+    <version>1.12-SNAPSHOT</version>
+    <relativePath>../pom.xml</relativePath>
   </parent>
   
   <modelVersion>4.0.0</modelVersion>
@@ -18,17 +18,7 @@
     <!-- Persistence layer dependencies -->
     <dependency>
       <groupId>org.hibernate</groupId>
-      <artifactId>hibernate-core</artifactId>
-    </dependency>
-    
-    <dependency>
-      <groupId>org.hibernate</groupId>
-      <artifactId>hibernate-entitymanager</artifactId>
-    </dependency>
-    
-    <dependency>
-      <groupId>org.hibernate</groupId>
-      <artifactId>hibernate-c3p0</artifactId>
+      <artifactId>hibernate-core-jakarta</artifactId>
     </dependency>
     
     <!-- Other external dependencies -->
@@ -48,8 +38,8 @@
     </dependency>
     
     <dependency>
-      <groupId>commons-lang</groupId>
-      <artifactId>commons-lang</artifactId>
+      <groupId>org.apache.commons</groupId>
+      <artifactId>commons-lang3</artifactId>
     </dependency>
 
     <dependency>
@@ -63,8 +53,8 @@
     </dependency>
 
     <dependency>
-      <groupId>org.glassfish</groupId>
-      <artifactId>javax.json</artifactId>
+      <groupId>jakarta.json</groupId>
+      <artifactId>jakarta.json-api</artifactId>
     </dependency>
 
     <dependency>
@@ -91,10 +81,10 @@
       <groupId>org.slf4j</groupId>
       <artifactId>jcl-over-slf4j</artifactId>
     </dependency>
-    
+
     <dependency>
-      <groupId>org.mindrot</groupId>
-      <artifactId>jbcrypt</artifactId>
+      <groupId>at.favre.lib</groupId>
+      <artifactId>bcrypt</artifactId>
     </dependency>
     
     <dependency>
@@ -122,16 +112,16 @@
       <artifactId>lucene-highlighter</artifactId>
     </dependency>
 
-    <dependency>
-      <groupId>com.sun.mail</groupId>
-      <artifactId>javax.mail</artifactId>
-    </dependency>
-
     <dependency>
       <groupId>com.squareup.okhttp3</groupId>
       <artifactId>okhttp</artifactId>
     </dependency>
-    
+
+    <dependency>
+      <groupId>org.apache.directory.api</groupId>
+      <artifactId>api-all</artifactId>
+    </dependency>
+
     <!-- Only there to read old index and rebuild them -->
     <dependency>
       <groupId>org.apache.lucene</groupId>
@@ -189,7 +179,7 @@
       <groupId>org.postgresql</groupId>
       <artifactId>postgresql</artifactId>
     </dependency>
-    
+
     <!-- Test dependencies -->
     <dependency>
       <groupId>junit</groupId>

docs-core/src/main/java/com/sismics/docs/core/constant/ConfigType.java

@@ -40,7 +40,25 @@ public enum ConfigType {
     INBOX_ENABLED,
     INBOX_HOSTNAME,
     INBOX_PORT,
+    INBOX_STARTTLS,
     INBOX_USERNAME,
     INBOX_PASSWORD,
-    INBOX_TAG
+    INBOX_FOLDER,
+    INBOX_TAG,
+    INBOX_AUTOMATIC_TAGS,
+    INBOX_DELETE_IMPORTED,
+
+    /**
+     * LDAP connection.
+     */
+    LDAP_ENABLED,
+    LDAP_HOST,
+    LDAP_PORT,
+    LDAP_USESSL,
+    LDAP_ADMIN_DN,
+    LDAP_ADMIN_PASSWORD,
+    LDAP_BASE_DN,
+    LDAP_FILTER,
+    LDAP_DEFAULT_EMAIL,
+    LDAP_DEFAULT_STORAGE
 }

docs-core/src/main/java/com/sismics/docs/core/constant/Constants.java

@@ -18,13 +18,18 @@ public class Constants {
     /**
      * Administrator's default password ("admin").
      */
-    public static final String DEFAULT_ADMIN_PASSWORD = "$2a$05$6Ny3TjrW3aVAL1or2SlcR.fhuDgPKp5jp.P9fBXwVNePgeLqb4i3C";
+    public static final String DEFAULT_ADMIN_PASSWORD = "$2y$10$xg0EEKVUehutDI1m6qQhVeFz7SMQMl1jQzjf2KkVsR2c7aV2vyyjK";
 
     /**
      * Administrator's default email.
      */
     public static final String DEFAULT_ADMIN_EMAIL = "admin@localhost";
 
+    /**
+     * Bcrypt default work factor
+     */
+    public static final int DEFAULT_BCRYPT_WORK = 10;
+
     /**
      * Guest user ID.
      */
@@ -38,7 +43,7 @@ public class Constants {
     /**
      * Supported document languages.
      */
-    public static final List<String> SUPPORTED_LANGUAGES = Lists.newArrayList("eng", "fra", "ita", "deu", "spa", "por", "pol", "rus", "ukr", "ara", "hin", "chi_sim", "chi_tra", "jpn", "tha", "kor", "nld", "tur");
+    public static final List<String> SUPPORTED_LANGUAGES = Lists.newArrayList("eng", "fra", "ita", "deu", "spa", "por", "pol", "rus", "ukr", "ara", "hin", "chi_sim", "chi_tra", "jpn", "tha", "kor", "nld", "tur", "heb", "hun", "fin", "swe", "lav", "dan", "nor", "vie", "ces", "sqi");
 
     /**
      * Base URL environment variable.
@@ -73,6 +78,11 @@ public class Constants {
      */
     public static final String ADMIN_EMAIL_INIT_ENV = "DOCS_ADMIN_EMAIL_INIT";
 
+    /**
+     * Work factor to be used by Bcrypt
+     */
+    public static final String BCRYPT_WORK_ENV = "DOCS_BCRYPT_WORK";
+
     /**
      * Expiration time of the password recovery in hours.
      */

docs-core/src/main/java/com/sismics/docs/core/constant/MetadataType.java

@@ -0,0 +1,14 @@
+package com.sismics.docs.core.constant;
+
+/**
+ * Metadata type.
+ *
+ * @author bgamard 
+ */
+public enum MetadataType {
+    STRING,
+    INTEGER,
+    FLOAT,
+    DATE,
+    BOOLEAN
+}

docs-core/src/main/java/com/sismics/docs/core/dao/AclDao.java

@@ -10,8 +10,8 @@ import com.sismics.docs.core.util.AuditLogUtil;
 import com.sismics.docs.core.util.SecurityUtil;
 import com.sismics.util.context.ThreadLocalContext;
 
-import javax.persistence.EntityManager;
-import javax.persistence.Query;
+import jakarta.persistence.EntityManager;
+import jakarta.persistence.Query;
 import java.util.ArrayList;
 import java.util.Date;
 import java.util.List;
@@ -128,6 +128,9 @@ public class AclDao {
         if (SecurityUtil.skipAclCheck(targetIdList)) {
             return true;
         }
+        if (targetIdList.isEmpty()) {
+            return false;
+        }
 
         EntityManager em = ThreadLocalContext.get().getEntityManager();
         StringBuilder sb = new StringBuilder("select a.ACL_ID_C from T_ACL a ");

docs-core/src/main/java/com/sismics/docs/core/dao/AuditLogDao.java

@@ -12,7 +12,7 @@ import com.sismics.docs.core.util.jpa.QueryParam;
 import com.sismics.docs.core.util.jpa.SortCriteria;
 import com.sismics.util.context.ThreadLocalContext;
 
-import javax.persistence.EntityManager;
+import jakarta.persistence.EntityManager;
 import java.sql.Timestamp;
 import java.util.*;
 

docs-core/src/main/java/com/sismics/docs/core/dao/AuthenticationTokenDao.java

@@ -4,8 +4,8 @@ import com.sismics.docs.core.model.jpa.AuthenticationToken;
 import com.sismics.util.context.ThreadLocalContext;
 import org.joda.time.DateTime;
 
-import javax.persistence.EntityManager;
-import javax.persistence.Query;
+import jakarta.persistence.EntityManager;
+import jakarta.persistence.Query;
 import java.util.Date;
 import java.util.List;
 import java.util.UUID;

docs-core/src/main/java/com/sismics/docs/core/dao/CommentDao.java

@@ -6,9 +6,9 @@ import com.sismics.docs.core.model.jpa.Comment;
 import com.sismics.docs.core.util.AuditLogUtil;
 import com.sismics.util.context.ThreadLocalContext;
 
-import javax.persistence.EntityManager;
-import javax.persistence.NoResultException;
-import javax.persistence.Query;
+import jakarta.persistence.EntityManager;
+import jakarta.persistence.NoResultException;
+import jakarta.persistence.Query;
 import java.sql.Timestamp;
 import java.util.ArrayList;
 import java.util.Date;
@@ -27,7 +27,6 @@ public class CommentDao {
      * @param comment Comment
      * @param userId User ID
      * @return New ID
-     * @throws Exception
      */
     public String create(Comment comment, String userId) {
         // Create the UUID
@@ -99,7 +98,7 @@ public class CommentDao {
         @SuppressWarnings("unchecked")
         List<Object[]> l = q.getResultList();
         
-        List<CommentDto> commentDtoList = new ArrayList<CommentDto>();
+        List<CommentDto> commentDtoList = new ArrayList<>();
         for (Object[] o : l) {
             int i = 0;
             CommentDto commentDto = new CommentDto();
@@ -107,7 +106,7 @@ public class CommentDao {
             commentDto.setContent((String) o[i++]);
             commentDto.setCreateTimestamp(((Timestamp) o[i++]).getTime());
             commentDto.setCreatorName((String) o[i++]);
-            commentDto.setCreatorEmail((String) o[i++]);
+            commentDto.setCreatorEmail((String) o[i]);
             commentDtoList.add(commentDto);
         }
         return commentDtoList;

docs-core/src/main/java/com/sismics/docs/core/dao/ConfigDao.java

@@ -4,8 +4,8 @@ import com.sismics.docs.core.constant.ConfigType;
 import com.sismics.docs.core.model.jpa.Config;
 import com.sismics.util.context.ThreadLocalContext;
 
-import javax.persistence.EntityManager;
-import javax.persistence.NoResultException;
+import jakarta.persistence.EntityManager;
+import jakarta.persistence.NoResultException;
 
 /**
  * Configuration parameter DAO.

docs-core/src/main/java/com/sismics/docs/core/dao/ContributorDao.java

@@ -4,8 +4,8 @@ import com.sismics.docs.core.dao.dto.ContributorDto;
 import com.sismics.docs.core.model.jpa.Contributor;
 import com.sismics.util.context.ThreadLocalContext;
 
-import javax.persistence.EntityManager;
-import javax.persistence.Query;
+import jakarta.persistence.EntityManager;
+import jakarta.persistence.Query;
 import java.util.ArrayList;
 import java.util.List;
 import java.util.UUID;
@@ -56,7 +56,7 @@ public class ContributorDao {
     @SuppressWarnings("unchecked")
     public List<ContributorDto> getByDocumentId(String documentId) {
         EntityManager em = ThreadLocalContext.get().getEntityManager();
-        StringBuilder sb = new StringBuilder("select u.USE_USERNAME_C, u.USE_EMAIL_C from T_CONTRIBUTOR c ");
+        StringBuilder sb = new StringBuilder("select distinct u.USE_USERNAME_C, u.USE_EMAIL_C from T_CONTRIBUTOR c ");
         sb.append(" join T_USER u on u.USE_ID_C = c.CTR_IDUSER_C ");
         sb.append(" where c.CTR_IDDOC_C = :documentId ");
         Query q = em.createNativeQuery(sb.toString());

docs-core/src/main/java/com/sismics/docs/core/dao/DocumentDao.java

@@ -7,9 +7,10 @@ import com.sismics.docs.core.model.jpa.Document;
 import com.sismics.docs.core.util.AuditLogUtil;
 import com.sismics.util.context.ThreadLocalContext;
 
-import javax.persistence.EntityManager;
-import javax.persistence.NoResultException;
-import javax.persistence.Query;
+import jakarta.persistence.EntityManager;
+import jakarta.persistence.NoResultException;
+import jakarta.persistence.Query;
+import jakarta.persistence.TypedQuery;
 import java.sql.Timestamp;
 import java.util.Date;
 import java.util.List;
@@ -50,10 +51,9 @@ public class DocumentDao {
      * @param limit Limit
      * @return List of documents
      */
-    @SuppressWarnings("unchecked")
     public List<Document> findAll(int offset, int limit) {
         EntityManager em = ThreadLocalContext.get().getEntityManager();
-        Query q = em.createQuery("select d from Document d where d.deleteDate is null");
+        TypedQuery<Document> q = em.createQuery("select d from Document d where d.deleteDate is null", Document.class);
         q.setFirstResult(offset);
         q.setMaxResults(limit);
         return q.getResultList();
@@ -65,10 +65,9 @@ public class DocumentDao {
      * @param userId User ID
      * @return List of documents
      */
-    @SuppressWarnings("unchecked")
     public List<Document> findByUserId(String userId) {
         EntityManager em = ThreadLocalContext.get().getEntityManager();
-        Query q = em.createQuery("select d from Document d where d.userId = :userId and d.deleteDate is null");
+        TypedQuery<Document> q = em.createQuery("select d from Document d where d.userId = :userId and d.deleteDate is null", Document.class);
         q.setParameter("userId", userId);
         return q.getResultList();
     }
@@ -138,16 +137,16 @@ public class DocumentDao {
         EntityManager em = ThreadLocalContext.get().getEntityManager();
             
         // Get the document
-        Query q = em.createQuery("select d from Document d where d.id = :id and d.deleteDate is null");
-        q.setParameter("id", id);
-        Document documentDb = (Document) q.getSingleResult();
+        TypedQuery<Document> dq = em.createQuery("select d from Document d where d.id = :id and d.deleteDate is null", Document.class);
+        dq.setParameter("id", id);
+        Document documentDb = dq.getSingleResult();
         
         // Delete the document
         Date dateNow = new Date();
         documentDb.setDeleteDate(dateNow);
 
         // Delete linked data
-        q = em.createQuery("update File f set f.deleteDate = :dateNow where f.documentId = :documentId and f.deleteDate is null");
+        Query q = em.createQuery("update File f set f.deleteDate = :dateNow where f.documentId = :documentId and f.deleteDate is null");
         q.setParameter("documentId", id);
         q.setParameter("dateNow", dateNow);
         q.executeUpdate();
@@ -179,10 +178,10 @@ public class DocumentDao {
      */
     public Document getById(String id) {
         EntityManager em = ThreadLocalContext.get().getEntityManager();
-        Query q = em.createQuery("select d from Document d where d.id = :id and d.deleteDate is null");
+        TypedQuery<Document> q = em.createQuery("select d from Document d where d.id = :id and d.deleteDate is null", Document.class);
         q.setParameter("id", id);
         try {
-            return (Document) q.getSingleResult();
+            return q.getSingleResult();
         } catch (NoResultException e) {
             return null;
         }
@@ -199,9 +198,9 @@ public class DocumentDao {
         EntityManager em = ThreadLocalContext.get().getEntityManager();
 
         // Get the document
-        Query q = em.createQuery("select d from Document d where d.id = :id and d.deleteDate is null");
+        TypedQuery<Document> q = em.createQuery("select d from Document d where d.id = :id and d.deleteDate is null", Document.class);
         q.setParameter("id", document.getId());
-        Document documentDb = (Document) q.getSingleResult();
+        Document documentDb = q.getSingleResult();
 
         // Update the document
         documentDb.setTitle(document.getTitle());
@@ -232,12 +231,11 @@ public class DocumentDao {
      */
     public void updateFileId(Document document) {
         EntityManager em = ThreadLocalContext.get().getEntityManager();
-        Query query = em.createNativeQuery("update T_DOCUMENT d set d.DOC_IDFILE_C = :fileId, d.DOC_UPDATEDATE_D = :updateDate where d.DOC_ID_C = :id");
+        Query query = em.createNativeQuery("update T_DOCUMENT d set DOC_IDFILE_C = :fileId, DOC_UPDATEDATE_D = :updateDate where d.DOC_ID_C = :id");
         query.setParameter("updateDate", new Date());
         query.setParameter("fileId", document.getFileId());
         query.setParameter("id", document.getId());
         query.executeUpdate();
-
     }
 
     /**

docs-core/src/main/java/com/sismics/docs/core/dao/DocumentMetadataDao.java

@@ -0,0 +1,89 @@
+package com.sismics.docs.core.dao;
+
+import com.sismics.docs.core.constant.MetadataType;
+import com.sismics.docs.core.dao.dto.DocumentMetadataDto;
+import com.sismics.docs.core.model.jpa.DocumentMetadata;
+import com.sismics.util.context.ThreadLocalContext;
+
+import jakarta.persistence.EntityManager;
+import jakarta.persistence.Query;
+import java.util.ArrayList;
+import java.util.List;
+import java.util.UUID;
+
+/**
+ * Document metadata DAO.
+ * 
+ * @author bgamard
+ */
+public class DocumentMetadataDao {
+    /**
+     * Creates a new document metadata.
+     *
+     * @param documentMetadata Document metadata
+     * @return New ID
+     */
+    public String create(DocumentMetadata documentMetadata) {
+        // Create the UUID
+        documentMetadata.setId(UUID.randomUUID().toString());
+
+        // Create the document metadata
+        EntityManager em = ThreadLocalContext.get().getEntityManager();
+        em.persist(documentMetadata);
+
+        return documentMetadata.getId();
+    }
+
+    /**
+     * Updates a document metadata.
+     *
+     * @param documentMetadata Document metadata
+     * @return Updated document metadata
+     */
+    public DocumentMetadata update(DocumentMetadata documentMetadata) {
+        EntityManager em = ThreadLocalContext.get().getEntityManager();
+
+        // Get the document metadata
+        Query q = em.createQuery("select u from DocumentMetadata u where u.id = :id");
+        q.setParameter("id", documentMetadata.getId());
+        DocumentMetadata documentMetadataDb = (DocumentMetadata) q.getSingleResult();
+
+        // Update the document metadata
+        documentMetadataDb.setValue(documentMetadata.getValue());
+
+        return documentMetadata;
+    }
+
+    /**
+     * Returns the list of all metadata values on a document.
+     *
+     * @param documentId Document ID
+     * @return List of metadata
+     */
+    @SuppressWarnings("unchecked")
+    public List<DocumentMetadataDto> getByDocumentId(String documentId) {
+        EntityManager em = ThreadLocalContext.get().getEntityManager();
+        StringBuilder sb = new StringBuilder("select dm.DME_ID_C, dm.DME_IDDOCUMENT_C, dm.DME_IDMETADATA_C, dm.DME_VALUE_C, m.MET_TYPE_C");
+        sb.append(" from T_DOCUMENT_METADATA dm, T_METADATA m ");
+        sb.append(" where dm.DME_IDMETADATA_C = m.MET_ID_C and dm.DME_IDDOCUMENT_C = :documentId and m.MET_DELETEDATE_D is null");
+
+        // Perform the search
+        Query q = em.createNativeQuery(sb.toString());
+        q.setParameter("documentId", documentId);
+        List<Object[]> l = q.getResultList();
+
+        // Assemble results
+        List<DocumentMetadataDto> dtoList = new ArrayList<>();
+        for (Object[] o : l) {
+            int i = 0;
+            DocumentMetadataDto dto = new DocumentMetadataDto();
+            dto.setId((String) o[i++]);
+            dto.setDocumentId((String) o[i++]);
+            dto.setMetadataId((String) o[i++]);
+            dto.setValue((String) o[i++]);
+            dto.setType(MetadataType.valueOf((String) o[i]));
+            dtoList.add(dto);
+        }
+        return dtoList;
+    }
+}

docs-core/src/main/java/com/sismics/docs/core/dao/FileDao.java

@@ -4,12 +4,16 @@ import com.sismics.docs.core.constant.AuditLogType;
 import com.sismics.docs.core.model.jpa.File;
 import com.sismics.docs.core.util.AuditLogUtil;
 import com.sismics.util.context.ThreadLocalContext;
+import jakarta.persistence.EntityManager;
+import jakarta.persistence.NoResultException;
+import jakarta.persistence.Query;
+import jakarta.persistence.TypedQuery;
 
-import javax.persistence.EntityManager;
-import javax.persistence.NoResultException;
-import javax.persistence.Query;
+import java.util.Collections;
 import java.util.Date;
+import java.util.HashMap;
 import java.util.List;
+import java.util.Map;
 import java.util.UUID;
 
 /**
@@ -47,10 +51,9 @@ public class FileDao {
      * @param limit Limit
      * @return List of files
      */
-    @SuppressWarnings("unchecked")
     public List<File> findAll(int offset, int limit) {
         EntityManager em = ThreadLocalContext.get().getEntityManager();
-        Query q = em.createQuery("select f from File f where f.deleteDate is null");
+        TypedQuery<File> q = em.createQuery("select f from File f where f.deleteDate is null", File.class);
         q.setFirstResult(offset);
         q.setMaxResults(limit);
         return q.getResultList();
@@ -62,28 +65,38 @@ public class FileDao {
      * @param userId User ID
      * @return List of files
      */
-    @SuppressWarnings("unchecked")
     public List<File> findByUserId(String userId) {
         EntityManager em = ThreadLocalContext.get().getEntityManager();
-        Query q = em.createQuery("select f from File f where f.userId = :userId and f.deleteDate is null");
+        TypedQuery<File> q = em.createQuery("select f from File f where f.userId = :userId and f.deleteDate is null", File.class);
         q.setParameter("userId", userId);
         return q.getResultList();
     }
+
+    /**
+     * Returns a list of active files.
+     *
+     * @param ids Files IDs
+     * @return List of files
+     */
+    public List<File> getFiles(List<String> ids) {
+        EntityManager em = ThreadLocalContext.get().getEntityManager();
+        TypedQuery<File> q = em.createQuery("select f from File f where f.id in :ids and f.deleteDate is null", File.class);
+        q.setParameter("ids", ids);
+        return q.getResultList();
+    }
     
     /**
-     * Returns an active file.
+     * Returns an active file or null.
      * 
      * @param id File ID
-     * @return Document
+     * @return File
      */
     public File getFile(String id) {
-        EntityManager em = ThreadLocalContext.get().getEntityManager();
-        Query q = em.createQuery("select f from File f where f.id = :id and f.deleteDate is null");
-        q.setParameter("id", id);
-        try {
-            return (File) q.getSingleResult();
-        } catch (NoResultException e) {
+        List<File> files = getFiles(List.of(id));
+        if (files.isEmpty()) {
             return null;
+        } else {
+            return files.get(0);
         }
     }
     
@@ -92,15 +105,15 @@ public class FileDao {
      * 
      * @param id File ID
      * @param userId User ID
-     * @return Document
+     * @return File
      */
     public File getFile(String id, String userId) {
         EntityManager em = ThreadLocalContext.get().getEntityManager();
-        Query q = em.createQuery("select f from File f where f.id = :id and f.userId = :userId and f.deleteDate is null");
+        TypedQuery<File> q = em.createQuery("select f from File f where f.id = :id and f.userId = :userId and f.deleteDate is null", File.class);
         q.setParameter("id", id);
         q.setParameter("userId", userId);
         try {
-            return (File) q.getSingleResult();
+            return q.getSingleResult();
         } catch (NoResultException e) {
             return null;
         }
@@ -116,9 +129,9 @@ public class FileDao {
         EntityManager em = ThreadLocalContext.get().getEntityManager();
             
         // Get the file
-        Query q = em.createQuery("select f from File f where f.id = :id and f.deleteDate is null");
+        TypedQuery<File> q = em.createQuery("select f from File f where f.id = :id and f.deleteDate is null", File.class);
         q.setParameter("id", id);
-        File fileDb = (File) q.getSingleResult();
+        File fileDb = q.getSingleResult();
         
         // Delete the file
         Date dateNow = new Date();
@@ -138,9 +151,9 @@ public class FileDao {
         EntityManager em = ThreadLocalContext.get().getEntityManager();
         
         // Get the file
-        Query q = em.createQuery("select f from File f where f.id = :id and f.deleteDate is null");
+        TypedQuery<File> q = em.createQuery("select f from File f where f.id = :id and f.deleteDate is null", File.class);
         q.setParameter("id", file.getId());
-        File fileDb = (File) q.getSingleResult();
+        File fileDb = q.getSingleResult();
 
         // Update the file
         fileDb.setDocumentId(file.getDocumentId());
@@ -150,10 +163,11 @@ public class FileDao {
         fileDb.setMimeType(file.getMimeType());
         fileDb.setVersionId(file.getVersionId());
         fileDb.setLatestVersion(file.isLatestVersion());
+        fileDb.setSize(file.getSize());
 
         return file;
     }
-    
+
     /**
      * Gets a file by its ID.
      * 
@@ -162,46 +176,82 @@ public class FileDao {
      */
     public File getActiveById(String id) {
         EntityManager em = ThreadLocalContext.get().getEntityManager();
-        Query q = em.createQuery("select f from File f where f.id = :id and f.deleteDate is null");
+        TypedQuery<File> q = em.createQuery("select f from File f where f.id = :id and f.deleteDate is null", File.class);
         q.setParameter("id", id);
         try {
-            return (File) q.getSingleResult();
+            return q.getSingleResult();
         } catch (NoResultException e) {
             return null;
         }
     }
     
     /**
-     * Get files by document ID or all orphan files of an user.
+     * Get files by document ID or all orphan files of a user.
      * 
      * @param userId User ID
      * @param documentId Document ID
      * @return List of files
      */
-    @SuppressWarnings("unchecked")
     public List<File> getByDocumentId(String userId, String documentId) {
         EntityManager em = ThreadLocalContext.get().getEntityManager();
         if (documentId == null) {
-            Query q = em.createQuery("select f from File f where f.documentId is null and f.deleteDate is null and f.latestVersion = true and f.userId = :userId order by f.createDate asc");
+            TypedQuery<File> q = em.createQuery("select f from File f where f.documentId is null and f.deleteDate is null and f.latestVersion = true and f.userId = :userId order by f.createDate asc", File.class);
             q.setParameter("userId", userId);
             return q.getResultList();
+        } else {
+            return getByDocumentsIds(Collections.singleton(documentId));
         }
-        Query q = em.createQuery("select f from File f where f.documentId = :documentId and f.latestVersion = true and f.deleteDate is null order by f.order asc");
-        q.setParameter("documentId", documentId);
+    }
+
+    /**
+     * Get files by documents IDs.
+     *
+     * @param documentIds Documents IDs
+     * @return List of files
+     */
+    public List<File> getByDocumentsIds(Iterable<String> documentIds) {
+        EntityManager em = ThreadLocalContext.get().getEntityManager();
+        TypedQuery<File> q = em.createQuery("select f from File f where f.documentId in :documentIds and f.latestVersion = true and f.deleteDate is null order by f.order asc", File.class);
+        q.setParameter("documentIds", documentIds);
         return q.getResultList();
     }
 
+    /**
+     * Get files count by documents IDs.
+     *
+     * @param documentIds Documents IDs
+     * @return the number of files per document id
+     */
+    public Map<String, Long> countByDocumentsIds(Iterable<String> documentIds) {
+        EntityManager em = ThreadLocalContext.get().getEntityManager();
+        Query q = em.createQuery("select f.documentId, count(*) from File f where f.documentId in :documentIds and f.latestVersion = true and f.deleteDate is null group by (f.documentId)");
+        q.setParameter("documentIds", documentIds);
+        Map<String, Long> result = new HashMap<>();
+        q.getResultList().forEach(o -> {
+            Object[] resultLine = (Object[]) o;
+            result.put((String) resultLine[0], (Long) resultLine[1]);
+        });
+        return result;
+    }
+
     /**
      * Get all files from a version.
      *
      * @param versionId Version ID
      * @return List of files
      */
-    @SuppressWarnings("unchecked")
     public List<File> getByVersionId(String versionId) {
         EntityManager em = ThreadLocalContext.get().getEntityManager();
-        Query q = em.createQuery("select f from File f where f.versionId = :versionId and f.deleteDate is null order by f.order asc");
+        TypedQuery<File> q = em.createQuery("select f from File f where f.versionId = :versionId and f.deleteDate is null order by f.order asc", File.class);
         q.setParameter("versionId", versionId);
         return q.getResultList();
     }
+
+    public List<File> getFilesWithUnknownSize(int limit) {
+        EntityManager em = ThreadLocalContext.get().getEntityManager();
+        TypedQuery<File> q = em.createQuery("select f from File f where f.size = :size and f.deleteDate is null order by f.order asc", File.class);
+        q.setParameter("size", File.UNKNOWN_SIZE);
+        q.setMaxResults(limit);
+        return q.getResultList();
+    }
 }

docs-core/src/main/java/com/sismics/docs/core/dao/GroupDao.java

@@ -12,9 +12,9 @@ import com.sismics.docs.core.util.jpa.QueryUtil;
 import com.sismics.docs.core.util.jpa.SortCriteria;
 import com.sismics.util.context.ThreadLocalContext;
 
-import javax.persistence.EntityManager;
-import javax.persistence.NoResultException;
-import javax.persistence.Query;
+import jakarta.persistence.EntityManager;
+import jakarta.persistence.NoResultException;
+import jakarta.persistence.Query;
 import java.util.*;
 
 /**
@@ -183,12 +183,10 @@ public class GroupDao {
         }
         
         criteriaList.add("g.GRP_DELETEDATE_D is null");
-        
-        if (!criteriaList.isEmpty()) {
-            sb.append(" where ");
-            sb.append(Joiner.on(" and ").join(criteriaList));
-        }
-        
+
+        sb.append(" where ");
+        sb.append(Joiner.on(" and ").join(criteriaList));
+
         // Perform the search
         QueryParam queryParam = QueryUtil.getSortedQueryParam(new QueryParam(sb.toString(), parameterMap), sortCriteria);
         @SuppressWarnings("unchecked")

docs-core/src/main/java/com/sismics/docs/core/dao/MetadataDao.java

@@ -0,0 +1,146 @@
+package com.sismics.docs.core.dao;
+
+import com.google.common.base.Joiner;
+import com.sismics.docs.core.constant.AuditLogType;
+import com.sismics.docs.core.constant.MetadataType;
+import com.sismics.docs.core.dao.criteria.MetadataCriteria;
+import com.sismics.docs.core.dao.dto.MetadataDto;
+import com.sismics.docs.core.model.jpa.Metadata;
+import com.sismics.docs.core.util.AuditLogUtil;
+import com.sismics.docs.core.util.jpa.QueryParam;
+import com.sismics.docs.core.util.jpa.QueryUtil;
+import com.sismics.docs.core.util.jpa.SortCriteria;
+import com.sismics.util.context.ThreadLocalContext;
+
+import jakarta.persistence.EntityManager;
+import jakarta.persistence.NoResultException;
+import jakarta.persistence.Query;
+import java.util.*;
+
+/**
+ * Metadata DAO.
+ * 
+ * @author bgamard
+ */
+public class MetadataDao {
+    /**
+     * Creates a new metdata.
+     *
+     * @param metadata Metadata
+     * @param userId User ID
+     * @return New ID
+     */
+    public String create(Metadata metadata, String userId) {
+        // Create the UUID
+        metadata.setId(UUID.randomUUID().toString());
+
+        // Create the metadata
+        EntityManager em = ThreadLocalContext.get().getEntityManager();
+        em.persist(metadata);
+
+        // Create audit log
+        AuditLogUtil.create(metadata, AuditLogType.CREATE, userId);
+
+        return metadata.getId();
+    }
+
+    /**
+     * Update a metadata.
+     *
+     * @param metadata Metadata to update
+     * @param userId User ID
+     * @return Updated metadata
+     */
+    public Metadata update(Metadata metadata, String userId) {
+        EntityManager em = ThreadLocalContext.get().getEntityManager();
+
+        // Get the metadata
+        Query q = em.createQuery("select r from Metadata r where r.id = :id and r.deleteDate is null");
+        q.setParameter("id", metadata.getId());
+        Metadata metadataDb = (Metadata) q.getSingleResult();
+
+        // Update the metadata
+        metadataDb.setName(metadata.getName());
+
+        // Create audit log
+        AuditLogUtil.create(metadataDb, AuditLogType.UPDATE, userId);
+
+        return metadataDb;
+    }
+
+    /**
+     * Gets an active metadata by its ID.
+     *
+     * @param id Metadata ID
+     * @return Metadata
+     */
+    public Metadata getActiveById(String id) {
+        EntityManager em = ThreadLocalContext.get().getEntityManager();
+        try {
+            Query q = em.createQuery("select r from Metadata r where r.id = :id and r.deleteDate is null");
+            q.setParameter("id", id);
+            return (Metadata) q.getSingleResult();
+        } catch (NoResultException e) {
+            return null;
+        }
+    }
+
+    /**
+     * Deletes a metadata.
+     *
+     * @param id Metadata ID
+     * @param userId User ID
+     */
+    public void delete(String id, String userId) {
+        EntityManager em = ThreadLocalContext.get().getEntityManager();
+
+        // Get the metadata
+        Query q = em.createQuery("select r from Metadata r where r.id = :id and r.deleteDate is null");
+        q.setParameter("id", id);
+        Metadata metadataDb = (Metadata) q.getSingleResult();
+
+        // Delete the metadata
+        Date dateNow = new Date();
+        metadataDb.setDeleteDate(dateNow);
+
+        // Create audit log
+        AuditLogUtil.create(metadataDb, AuditLogType.DELETE, userId);
+    }
+
+    /**
+     * Returns the list of all metadata.
+     *
+     * @param criteria Search criteria
+     * @param sortCriteria Sort criteria
+     * @return List of metadata
+     */
+    public List<MetadataDto> findByCriteria(MetadataCriteria criteria, SortCriteria sortCriteria) {
+        Map<String, Object> parameterMap = new HashMap<>();
+        List<String> criteriaList = new ArrayList<>();
+
+        StringBuilder sb = new StringBuilder("select m.MET_ID_C c0, m.MET_NAME_C c1, m.MET_TYPE_C c2");
+        sb.append(" from T_METADATA m ");
+
+        criteriaList.add("m.MET_DELETEDATE_D is null");
+
+        sb.append(" where ");
+        sb.append(Joiner.on(" and ").join(criteriaList));
+
+        // Perform the search
+        QueryParam queryParam = QueryUtil.getSortedQueryParam(new QueryParam(sb.toString(), parameterMap), sortCriteria);
+        @SuppressWarnings("unchecked")
+        List<Object[]> l = QueryUtil.getNativeQuery(queryParam).getResultList();
+
+        // Assemble results
+        List<MetadataDto> dtoList = new ArrayList<>();
+        for (Object[] o : l) {
+            int i = 0;
+            MetadataDto dto = new MetadataDto();
+            dto.setId((String) o[i++]);
+            dto.setName((String) o[i++]);
+            dto.setType(MetadataType.valueOf((String) o[i]));
+            dtoList.add(dto);
+        }
+        return dtoList;
+    }
+}

docs-core/src/main/java/com/sismics/docs/core/dao/PasswordRecoveryDao.java

@@ -6,9 +6,9 @@ import com.sismics.util.context.ThreadLocalContext;
 import org.joda.time.DateTime;
 import org.joda.time.DurationFieldType;
 
-import javax.persistence.EntityManager;
-import javax.persistence.NoResultException;
-import javax.persistence.Query;
+import jakarta.persistence.EntityManager;
+import jakarta.persistence.NoResultException;
+import jakarta.persistence.Query;
 import java.util.Date;
 import java.util.UUID;
 

docs-core/src/main/java/com/sismics/docs/core/dao/RelationDao.java

@@ -4,8 +4,8 @@ import com.sismics.docs.core.dao.dto.RelationDto;
 import com.sismics.docs.core.model.jpa.Relation;
 import com.sismics.util.context.ThreadLocalContext;
 
-import javax.persistence.EntityManager;
-import javax.persistence.Query;
+import jakarta.persistence.EntityManager;
+import jakarta.persistence.Query;
 import java.util.*;
 
 /**
@@ -36,13 +36,13 @@ public class RelationDao {
         List<Object[]> l = q.getResultList();
         
         // Assemble results
-        List<RelationDto> relationDtoList = new ArrayList<RelationDto>();
+        List<RelationDto> relationDtoList = new ArrayList<>();
         for (Object[] o : l) {
             int i = 0;
             RelationDto relationDto = new RelationDto();
             relationDto.setId((String) o[i++]);
             relationDto.setTitle((String) o[i++]);
-            String fromDocId = (String) o[i++];
+            String fromDocId = (String) o[i];
             relationDto.setSource(documentId.equals(fromDocId));
             relationDtoList.add(relationDto);
         }

docs-core/src/main/java/com/sismics/docs/core/dao/RoleBaseFunctionDao.java

@@ -3,8 +3,8 @@ package com.sismics.docs.core.dao;
 import com.google.common.collect.Sets;
 import com.sismics.util.context.ThreadLocalContext;
 
-import javax.persistence.EntityManager;
-import javax.persistence.Query;
+import jakarta.persistence.EntityManager;
+import jakarta.persistence.Query;
 import java.util.Set;
 
 /**

docs-core/src/main/java/com/sismics/docs/core/dao/RouteDao.java

@@ -11,7 +11,7 @@ import com.sismics.docs.core.util.jpa.QueryUtil;
 import com.sismics.docs.core.util.jpa.SortCriteria;
 import com.sismics.util.context.ThreadLocalContext;
 
-import javax.persistence.EntityManager;
+import jakarta.persistence.EntityManager;
 import java.sql.Timestamp;
 import java.util.*;
 
@@ -64,10 +64,8 @@ public class RouteDao {
         }
         criteriaList.add("r.RTE_DELETEDATE_D is null");
 
-        if (!criteriaList.isEmpty()) {
-            sb.append(" where ");
-            sb.append(Joiner.on(" and ").join(criteriaList));
-        }
+        sb.append(" where ");
+        sb.append(Joiner.on(" and ").join(criteriaList));
 
         // Perform the search
         QueryParam queryParam = QueryUtil.getSortedQueryParam(new QueryParam(sb.toString(), parameterMap), sortCriteria);

docs-core/src/main/java/com/sismics/docs/core/dao/RouteModelDao.java

@@ -4,7 +4,6 @@ import com.google.common.base.Joiner;
 import com.sismics.docs.core.constant.AuditLogType;
 import com.sismics.docs.core.dao.criteria.RouteModelCriteria;
 import com.sismics.docs.core.dao.dto.RouteModelDto;
-import com.sismics.docs.core.model.jpa.File;
 import com.sismics.docs.core.model.jpa.RouteModel;
 import com.sismics.docs.core.util.AuditLogUtil;
 import com.sismics.docs.core.util.SecurityUtil;
@@ -13,9 +12,9 @@ import com.sismics.docs.core.util.jpa.QueryUtil;
 import com.sismics.docs.core.util.jpa.SortCriteria;
 import com.sismics.util.context.ThreadLocalContext;
 
-import javax.persistence.EntityManager;
-import javax.persistence.NoResultException;
-import javax.persistence.Query;
+import jakarta.persistence.EntityManager;
+import jakarta.persistence.NoResultException;
+import jakarta.persistence.Query;
 import java.sql.Timestamp;
 import java.util.*;
 
@@ -62,7 +61,7 @@ public class RouteModelDao {
         q.setParameter("id", routeModel.getId());
         RouteModel routeModelDb = (RouteModel) q.getSingleResult();
 
-        // Update the group
+        // Update the route model
         routeModelDb.setName(routeModel.getName());
         routeModelDb.setSteps(routeModel.getSteps());
 
@@ -146,10 +145,8 @@ public class RouteModelDao {
 
         criteriaList.add("rm.RTM_DELETEDATE_D is null");
 
-        if (!criteriaList.isEmpty()) {
-            sb.append(" where ");
-            sb.append(Joiner.on(" and ").join(criteriaList));
-        }
+        sb.append(" where ");
+        sb.append(Joiner.on(" and ").join(criteriaList));
 
         // Perform the search
         QueryParam queryParam = QueryUtil.getSortedQueryParam(new QueryParam(sb.toString(), parameterMap), sortCriteria);

docs-core/src/main/java/com/sismics/docs/core/dao/RouteStepDao.java

@@ -12,8 +12,8 @@ import com.sismics.docs.core.util.jpa.QueryUtil;
 import com.sismics.docs.core.util.jpa.SortCriteria;
 import com.sismics.util.context.ThreadLocalContext;
 
-import javax.persistence.EntityManager;
-import javax.persistence.Query;
+import jakarta.persistence.EntityManager;
+import jakarta.persistence.Query;
 import java.sql.Timestamp;
 import java.util.*;
 
@@ -90,10 +90,8 @@ public class RouteStepDao {
         }
         criteriaList.add("rs.RTP_DELETEDATE_D is null");
 
-        if (!criteriaList.isEmpty()) {
-            sb.append(" where ");
-            sb.append(Joiner.on(" and ").join(criteriaList));
-        }
+        sb.append(" where ");
+        sb.append(Joiner.on(" and ").join(criteriaList));
 
         // Perform the search
         QueryParam queryParam = QueryUtil.getSortedQueryParam(new QueryParam(sb.toString(), parameterMap), sortCriteria);

docs-core/src/main/java/com/sismics/docs/core/dao/ShareDao.java

@@ -3,8 +3,8 @@ package com.sismics.docs.core.dao;
 import com.sismics.docs.core.model.jpa.Share;
 import com.sismics.util.context.ThreadLocalContext;
 
-import javax.persistence.EntityManager;
-import javax.persistence.Query;
+import jakarta.persistence.EntityManager;
+import jakarta.persistence.Query;
 import java.util.Date;
 import java.util.UUID;
 
@@ -19,7 +19,6 @@ public class ShareDao {
      * 
      * @param share Share
      * @return New ID
-     * @throws Exception
      */
     public String create(Share share) {
         // Create the UUID

docs-core/src/main/java/com/sismics/docs/core/dao/TagDao.java

@@ -13,9 +13,9 @@ import com.sismics.docs.core.util.jpa.QueryUtil;
 import com.sismics.docs.core.util.jpa.SortCriteria;
 import com.sismics.util.context.ThreadLocalContext;
 
-import javax.persistence.EntityManager;
-import javax.persistence.NoResultException;
-import javax.persistence.Query;
+import jakarta.persistence.EntityManager;
+import jakarta.persistence.NoResultException;
+import jakarta.persistence.Query;
 import java.util.*;
 
 /**
@@ -199,10 +199,8 @@ public class TagDao {
 
         criteriaList.add("t.TAG_DELETEDATE_D is null");
 
-        if (!criteriaList.isEmpty()) {
-            sb.append(" where ");
-            sb.append(Joiner.on(" and ").join(criteriaList));
-        }
+        sb.append(" where ");
+        sb.append(Joiner.on(" and ").join(criteriaList));
 
         // Perform the search
         QueryParam queryParam = QueryUtil.getSortedQueryParam(new QueryParam(sb.toString(), parameterMap), sortCriteria);

docs-core/src/main/java/com/sismics/docs/core/dao/UserDao.java

@@ -1,7 +1,14 @@
 package com.sismics.docs.core.dao;
 
 import com.google.common.base.Joiner;
+import com.google.common.base.Strings;
+import at.favre.lib.crypto.bcrypt.BCrypt;
+import org.joda.time.DateTime;
+import org.slf4j.Logger;
+import org.slf4j.LoggerFactory;
+
 import com.sismics.docs.core.constant.AuditLogType;
+import com.sismics.docs.core.constant.Constants;
 import com.sismics.docs.core.dao.criteria.UserCriteria;
 import com.sismics.docs.core.dao.dto.UserDto;
 import com.sismics.docs.core.model.jpa.User;
@@ -11,12 +18,10 @@ import com.sismics.docs.core.util.jpa.QueryParam;
 import com.sismics.docs.core.util.jpa.QueryUtil;
 import com.sismics.docs.core.util.jpa.SortCriteria;
 import com.sismics.util.context.ThreadLocalContext;
-import org.joda.time.DateTime;
-import org.mindrot.jbcrypt.BCrypt;
 
-import javax.persistence.EntityManager;
-import javax.persistence.NoResultException;
-import javax.persistence.Query;
+import jakarta.persistence.EntityManager;
+import jakarta.persistence.NoResultException;
+import jakarta.persistence.Query;
 import java.sql.Timestamp;
 import java.util.*;
 
@@ -26,6 +31,11 @@ import java.util.*;
  * @author jtremeaux
  */
 public class UserDao {
+    /**
+     * Logger.
+     */
+    private static final Logger log = LoggerFactory.getLogger(UserDao.class);
+
     /**
      * Authenticates an user.
      * 
@@ -39,7 +49,8 @@ public class UserDao {
         q.setParameter("username", username);
         try {
             User user = (User) q.getSingleResult();
-            if (!BCrypt.checkpw(password, user.getPassword()) || user.getDisableDate() != null) {
+            BCrypt.Result result = BCrypt.verifyer().verify(password.toCharArray(), user.getPassword());
+            if (!result.verified || user.getDisableDate() != null) {
                 return null;
             }
             return user;
@@ -277,7 +288,21 @@ public class UserDao {
      * @return Hashed password
      */
     private String hashPassword(String password) {
-        return BCrypt.hashpw(password, BCrypt.gensalt());
+        int bcryptWork = Constants.DEFAULT_BCRYPT_WORK;
+        String envBcryptWork = System.getenv(Constants.BCRYPT_WORK_ENV);
+        if (!Strings.isNullOrEmpty(envBcryptWork)) {
+            try {
+                int envBcryptWorkInt = Integer.parseInt(envBcryptWork);
+                if (envBcryptWorkInt >= 4 && envBcryptWorkInt <= 31) {
+                    bcryptWork = envBcryptWorkInt;
+                } else {
+                    log.warn(Constants.BCRYPT_WORK_ENV + " needs to be in range 4...31. Falling back to " + Constants.DEFAULT_BCRYPT_WORK + ".");
+                }
+            } catch (NumberFormatException e) {
+                log.warn(Constants.BCRYPT_WORK_ENV + " needs to be a number in range 4...31. Falling back to " + Constants.DEFAULT_BCRYPT_WORK + ".");
+            }
+        }
+        return BCrypt.withDefaults().hashToString(bcryptWork, password.toCharArray());
     }
     
     /**

docs-core/src/main/java/com/sismics/docs/core/dao/VocabularyDao.java

@@ -3,9 +3,9 @@ package com.sismics.docs.core.dao;
 import com.sismics.docs.core.model.jpa.Vocabulary;
 import com.sismics.util.context.ThreadLocalContext;
 
-import javax.persistence.EntityManager;
-import javax.persistence.NoResultException;
-import javax.persistence.Query;
+import jakarta.persistence.EntityManager;
+import jakarta.persistence.NoResultException;
+import jakarta.persistence.Query;
 import java.util.List;
 import java.util.UUID;
 
@@ -20,7 +20,6 @@ public class VocabularyDao {
      * 
      * @param vocabulary Vocabulary
      * @return New ID
-     * @throws Exception
      */
     public String create(Vocabulary vocabulary) {
         // Create the UUID

docs-core/src/main/java/com/sismics/docs/core/dao/WebhookDao.java

@@ -9,9 +9,9 @@ import com.sismics.docs.core.util.jpa.QueryUtil;
 import com.sismics.docs.core.util.jpa.SortCriteria;
 import com.sismics.util.context.ThreadLocalContext;
 
-import javax.persistence.EntityManager;
-import javax.persistence.NoResultException;
-import javax.persistence.Query;
+import jakarta.persistence.EntityManager;
+import jakarta.persistence.NoResultException;
+import jakarta.persistence.Query;
 import java.sql.Timestamp;
 import java.util.*;
 
@@ -42,11 +42,9 @@ public class WebhookDao {
         }
         criteriaList.add("w.WHK_DELETEDATE_D is null");
 
-        if (!criteriaList.isEmpty()) {
-            sb.append(" where ");
-            sb.append(Joiner.on(" and ").join(criteriaList));
-        }
-        
+        sb.append(" where ");
+        sb.append(Joiner.on(" and ").join(criteriaList));
+
         // Perform the search
         QueryParam queryParam = QueryUtil.getSortedQueryParam(new QueryParam(sb.toString(), parameterMap), sortCriteria);
         @SuppressWarnings("unchecked")

docs-core/src/main/java/com/sismics/docs/core/dao/criteria/DocumentCriteria.java

@@ -1,5 +1,6 @@
 package com.sismics.docs.core.dao.criteria;
 
+import java.util.ArrayList;
 import java.util.Date;
 import java.util.List;
 
@@ -49,13 +50,13 @@ public class DocumentCriteria {
      * Tag IDs.
      * The first level list will be AND'ed and the second level list will be OR'ed.
      */
-    private List<List<String>> tagIdList;
+    private List<List<String>> tagIdList = new ArrayList<>();
     
     /**
-     * Tag IDs to excluded.
+     * Tag IDs to exclude.
      * The first and second level list will be excluded.
      */
-    private List<List<String>> excludedTagIdList;
+    private List<List<String>> excludedTagIdList = new ArrayList<>();
 
     /**
      * Shared status.
@@ -76,7 +77,17 @@ public class DocumentCriteria {
      * A route is active.
      */
     private Boolean activeRoute;
-    
+
+    /**
+     * MIME type of a file.
+     */
+    private String mimeType;
+
+    /**
+     * Titles to include.
+     */
+    private List<String> titleList = new ArrayList<>();
+
     public List<String> getTargetIdList() {
         return targetIdList;
     }
@@ -121,19 +132,10 @@ public class DocumentCriteria {
         return tagIdList;
     }
 
-    public void setTagIdList(List<List<String>> tagIdList) {
-        this.tagIdList = tagIdList;
-    }
-
     public List<List<String>> getExcludedTagIdList() {
         return excludedTagIdList;
     }
 
-    public DocumentCriteria setExcludedTagIdList(List<List<String>> excludedTagIdList) {
-        this.excludedTagIdList = excludedTagIdList;
-        return this;
-    }
-
     public Boolean getShared() {
         return shared;
     }
@@ -157,11 +159,7 @@ public class DocumentCriteria {
     public void setCreatorId(String creatorId) {
         this.creatorId = creatorId;
     }
-
-    public Boolean getActiveRoute() {
-        return activeRoute;
-    }
-
+ 
     public Date getUpdateDateMin() {
         return updateDateMin;
     }
@@ -178,7 +176,23 @@ public class DocumentCriteria {
         this.updateDateMax = updateDateMax;
     }
 
+    public Boolean getActiveRoute() {
+        return activeRoute;
+    }
+
     public void setActiveRoute(Boolean activeRoute) {
         this.activeRoute = activeRoute;
     }
+
+    public String getMimeType() {
+        return mimeType;
+    }
+
+    public void setMimeType(String mimeType) {
+        this.mimeType = mimeType;
+    }
+
+    public List<String> getTitleList() {
+        return titleList;
+    }
 }

docs-core/src/main/java/com/sismics/docs/core/dao/criteria/MetadataCriteria.java

@@ -0,0 +1,9 @@
+package com.sismics.docs.core.dao.criteria;
+
+/**
+ * Metadata criteria.
+ *
+ * @author bgamard 
+ */
+public class MetadataCriteria {
+}

docs-core/src/main/java/com/sismics/docs/core/dao/dto/DocumentMetadataDto.java

@@ -0,0 +1,94 @@
+package com.sismics.docs.core.dao.dto;
+
+import com.sismics.docs.core.constant.MetadataType;
+
+/**
+ * Document metadata DTO.
+ *
+ * @author bgamard 
+ */
+public class DocumentMetadataDto {
+    /**
+     * Document metadata ID.
+     */
+    private String id;
+
+    /**
+     * Document ID.
+     */
+    private String documentId;
+
+    /**
+     * Metadata ID.
+     */
+    private String metadataId;
+    
+    /**
+     * Name.
+     */
+    private String name;
+
+    /**
+     * Value.
+     */
+    private String value;
+
+    /**
+     * Type.
+     */
+    private MetadataType type;
+
+    public String getId() {
+        return id;
+    }
+
+    public DocumentMetadataDto setId(String id) {
+        this.id = id;
+        return this;
+    }
+
+    public String getName() {
+        return name;
+    }
+
+    public DocumentMetadataDto setName(String name) {
+        this.name = name;
+        return this;
+    }
+
+    public MetadataType getType() {
+        return type;
+    }
+
+    public DocumentMetadataDto setType(MetadataType type) {
+        this.type = type;
+        return this;
+    }
+
+    public String getDocumentId() {
+        return documentId;
+    }
+
+    public DocumentMetadataDto setDocumentId(String documentId) {
+        this.documentId = documentId;
+        return this;
+    }
+
+    public String getMetadataId() {
+        return metadataId;
+    }
+
+    public DocumentMetadataDto setMetadataId(String metadataId) {
+        this.metadataId = metadataId;
+        return this;
+    }
+
+    public String getValue() {
+        return value;
+    }
+
+    public DocumentMetadataDto setValue(String value) {
+        this.value = value;
+        return this;
+    }
+}

docs-core/src/main/java/com/sismics/docs/core/dao/dto/MetadataDto.java

@@ -0,0 +1,52 @@
+package com.sismics.docs.core.dao.dto;
+
+import com.sismics.docs.core.constant.MetadataType;
+
+/**
+ * Metadata DTO.
+ *
+ * @author bgamard 
+ */
+public class MetadataDto {
+    /**
+     * Metadata ID.
+     */
+    private String id;
+    
+    /**
+     * Name.
+     */
+    private String name;
+
+    /**
+     * Type.
+     */
+    private MetadataType type;
+
+    public String getId() {
+        return id;
+    }
+
+    public MetadataDto setId(String id) {
+        this.id = id;
+        return this;
+    }
+
+    public String getName() {
+        return name;
+    }
+
+    public MetadataDto setName(String name) {
+        this.name = name;
+        return this;
+    }
+
+    public MetadataType getType() {
+        return type;
+    }
+
+    public MetadataDto setType(MetadataType type) {
+        this.type = type;
+        return this;
+    }
+}

docs-core/src/main/java/com/sismics/docs/core/dao/dto/RouteStepDto.java

@@ -3,8 +3,8 @@ package com.sismics.docs.core.dao.dto;
 import com.sismics.docs.core.constant.RouteStepType;
 import com.sismics.util.JsonUtil;
 
-import javax.json.Json;
-import javax.json.JsonObjectBuilder;
+import jakarta.json.Json;
+import jakarta.json.JsonObjectBuilder;
 
 /**
  * Route step DTO.

docs-core/src/main/java/com/sismics/docs/core/event/DocumentCreatedAsyncEvent.java

@@ -1,7 +1,6 @@
 package com.sismics.docs.core.event;
 
 import com.google.common.base.MoreObjects;
-import com.sismics.docs.core.model.jpa.Document;
 
 /**
  * Document created event.
@@ -10,32 +9,22 @@ import com.sismics.docs.core.model.jpa.Document;
  */
 public class DocumentCreatedAsyncEvent extends UserEvent {
     /**
-     * Created document.
+     * Document ID.
      */
-    private Document document;
-    
-    /**
-     * Getter of document.
-     *
-     * @return the document
-     */
-    public Document getDocument() {
-        return document;
+    private String documentId;
+
+    public String getDocumentId() {
+        return documentId;
     }
 
-    /**
-     * Setter of document.
-     *
-     * @param document document
-     */
-    public void setDocument(Document document) {
-        this.document = document;
+    public void setDocumentId(String documentId) {
+        this.documentId = documentId;
     }
 
     @Override
     public String toString() {
         return MoreObjects.toStringHelper(this)
-            .add("document", document)
-            .toString();
+                .add("documentId", documentId)
+                .toString();
     }
 }

docs-core/src/main/java/com/sismics/docs/core/event/FileDeletedAsyncEvent.java

@@ -1,7 +1,6 @@
 package com.sismics.docs.core.event;
 
 import com.google.common.base.MoreObjects;
-import com.sismics.docs.core.model.jpa.File;
 
 /**
  * File deleted event.
@@ -10,22 +9,33 @@ import com.sismics.docs.core.model.jpa.File;
  */
 public class FileDeletedAsyncEvent extends UserEvent {
     /**
-     * Deleted file.
+     * File ID.
      */
-    private File file;
-    
-    public File getFile() {
-        return file;
+    private String fileId;
+
+    private Long fileSize;
+
+    public String getFileId() {
+        return fileId;
     }
 
-    public void setFile(File file) {
-        this.file = file;
+    public void setFileId(String fileId) {
+        this.fileId = fileId;
     }
-    
+
+    public Long getFileSize() {
+        return fileSize;
+    }
+
+    public void setFileSize(Long fileSize) {
+        this.fileSize = fileSize;
+    }
+
     @Override
     public String toString() {
         return MoreObjects.toStringHelper(this)
-            .add("file", file)
+            .add("fileId", fileId)
+            .add("fileSize", fileSize)
             .toString();
     }
-}
+}

docs-core/src/main/java/com/sismics/docs/core/event/FileEvent.java

@@ -1,7 +1,6 @@
 package com.sismics.docs.core.event;
 
 import com.google.common.base.MoreObjects;
-import com.sismics.docs.core.model.jpa.File;
 
 import java.nio.file.Path;
 
@@ -12,9 +11,9 @@ import java.nio.file.Path;
  */
 public abstract class FileEvent extends UserEvent {
     /**
-     * Created file.
+     * File ID.
      */
-    private File file;
+    private String fileId;
     
     /**
      * Language of the file.
@@ -25,15 +24,15 @@ public abstract class FileEvent extends UserEvent {
      * Unencrypted original file.
      */
     private Path unencryptedFile;
-    
-    public File getFile() {
-        return file;
+
+    public String getFileId() {
+        return fileId;
     }
 
-    public void setFile(File file) {
-        this.file = file;
+    public void setFileId(String fileId) {
+        this.fileId = fileId;
     }
-    
+
     public String getLanguage() {
         return language;
     }
@@ -54,7 +53,7 @@ public abstract class FileEvent extends UserEvent {
     @Override
     public String toString() {
         return MoreObjects.toStringHelper(this)
-            .add("file", file)
+            .add("fileId", fileId)
             .add("language", language)
             .toString();
     }

docs-core/src/main/java/com/sismics/docs/core/listener/async/DocumentCreatedAsyncListener.java

@@ -3,9 +3,11 @@ package com.sismics.docs.core.listener.async;
 import com.google.common.eventbus.AllowConcurrentEvents;
 import com.google.common.eventbus.Subscribe;
 import com.sismics.docs.core.dao.ContributorDao;
+import com.sismics.docs.core.dao.DocumentDao;
 import com.sismics.docs.core.event.DocumentCreatedAsyncEvent;
 import com.sismics.docs.core.model.context.AppContext;
 import com.sismics.docs.core.model.jpa.Contributor;
+import com.sismics.docs.core.model.jpa.Document;
 import com.sismics.docs.core.util.TransactionUtil;
 import org.slf4j.Logger;
 import org.slf4j.LoggerFactory;
@@ -34,15 +36,22 @@ public class DocumentCreatedAsyncListener {
         }
 
         TransactionUtil.handle(() -> {
+            // Fetch a fresh document
+            Document document = new DocumentDao().getById(event.getDocumentId());
+            if (document == null) {
+                // The document has been deleted since
+                return;
+            }
+
             // Add the first contributor (the creator of the document)
             ContributorDao contributorDao = new ContributorDao();
             Contributor contributor = new Contributor();
-            contributor.setDocumentId(event.getDocument().getId());
+            contributor.setDocumentId(event.getDocumentId());
             contributor.setUserId(event.getUserId());
             contributorDao.create(contributor);
 
             // Update index
-            AppContext.getInstance().getIndexingHandler().createDocument(event.getDocument());
+            AppContext.getInstance().getIndexingHandler().createDocument(document);
         });
     }
 }

docs-core/src/main/java/com/sismics/docs/core/listener/async/FileDeletedAsyncListener.java

@@ -2,9 +2,11 @@ package com.sismics.docs.core.listener.async;
 
 import com.google.common.eventbus.AllowConcurrentEvents;
 import com.google.common.eventbus.Subscribe;
+import com.sismics.docs.core.dao.UserDao;
 import com.sismics.docs.core.event.FileDeletedAsyncEvent;
 import com.sismics.docs.core.model.context.AppContext;
 import com.sismics.docs.core.model.jpa.File;
+import com.sismics.docs.core.model.jpa.User;
 import com.sismics.docs.core.util.FileUtil;
 import com.sismics.docs.core.util.TransactionUtil;
 import org.slf4j.Logger;
@@ -12,7 +14,7 @@ import org.slf4j.LoggerFactory;
 
 /**
  * Listener on file deleted.
- * 
+ *
  * @author bgamard
  */
 public class FileDeletedAsyncListener {
@@ -23,7 +25,7 @@ public class FileDeletedAsyncListener {
 
     /**
      * File deleted.
-     * 
+     *
      * @param event File deleted event
      * @throws Exception e
      */
@@ -33,14 +35,31 @@ public class FileDeletedAsyncListener {
         if (log.isInfoEnabled()) {
             log.info("File deleted event: " + event.toString());
         }
+        TransactionUtil.handle(() -> {
+            // Update the user quota
+            UserDao userDao = new UserDao();
+            User user = userDao.getById(event.getUserId());
+            if (user != null) {
+                Long fileSize = event.getFileSize();
+
+                if (fileSize.equals(File.UNKNOWN_SIZE)) {
+                    // The file size was not in the database, in this case we need to get from the unencrypted size.
+                    fileSize = FileUtil.getFileSize(event.getFileId(), user);
+                }
+
+                if (! fileSize.equals(File.UNKNOWN_SIZE)) {
+                    user.setStorageCurrent(user.getStorageCurrent() - fileSize);
+                    userDao.updateQuota(user);
+                }
+            }
+        });
 
         // Delete the file from storage
-        File file = event.getFile();
-        FileUtil.delete(file);
+        FileUtil.delete(event.getFileId());
 
         TransactionUtil.handle(() -> {
             // Update index
-            AppContext.getInstance().getIndexingHandler().deleteDocument(file.getId());
+            AppContext.getInstance().getIndexingHandler().deleteDocument(event.getFileId());
         });
     }
 }

docs-core/src/main/java/com/sismics/docs/core/listener/async/FileProcessingAsyncListener.java

@@ -28,6 +28,7 @@ import java.io.OutputStream;
 import java.nio.file.Files;
 import java.nio.file.Path;
 import java.text.MessageFormat;
+import java.util.concurrent.atomic.AtomicReference;
 
 /**
  * Listener on file processing.
@@ -52,15 +53,7 @@ public class FileProcessingAsyncListener {
             log.info("File created event: " + event.toString());
         }
 
-        TransactionUtil.handle(() -> {
-            // Generate thumbnail, extract content
-            processFile(event);
-
-            // Update index
-            AppContext.getInstance().getIndexingHandler().createFile(event.getFile());
-        });
-
-        FileUtil.endProcessingFile(event.getFile().getId());
+        processFile(event, true);
     }
 
     /**
@@ -71,43 +64,84 @@ public class FileProcessingAsyncListener {
     @Subscribe
     @AllowConcurrentEvents
     public void on(final FileUpdatedAsyncEvent event) {
-        if (log.isInfoEnabled()) {
-            log.info("File updated event: " + event.toString());
-        }
+        log.info("File updated event: " + event.toString());
 
-        TransactionUtil.handle(() -> {
-            // Generate thumbnail, extract content
-            processFile(event);
-
-            // Update index
-            AppContext.getInstance().getIndexingHandler().updateFile(event.getFile());
-        });
-
-        FileUtil.endProcessingFile(event.getFile().getId());
+        processFile(event, false);
     }
 
     /**
-     * Process the file (create/update).
+     * Process a file :
+     * Generate thumbnails
+     * Extract and save text content
      *
      * @param event File event
+     * @param isFileCreated True if the file was just created
      */
-    private void processFile(FileEvent event) {
+    private void processFile(FileEvent event, boolean isFileCreated) {
+        AtomicReference<File> file = new AtomicReference<>();
+        AtomicReference<User> user = new AtomicReference<>();
+
+        // Open a first transaction to get what we need to start the processing
+        TransactionUtil.handle(() -> {
+            // Generate thumbnail, extract content
+            file.set(new FileDao().getActiveById(event.getFileId()));
+            if (file.get() == null) {
+                // The file has been deleted since
+                return;
+            }
+
+            // Get the creating user from the database for its private key
+            UserDao userDao = new UserDao();
+            user.set(userDao.getById(file.get().getUserId()));
+        });
+
+        // Process the file outside of a transaction
+        if (user.get() == null || file.get() == null) {
+            // The user or file has been deleted
+            FileUtil.endProcessingFile(event.getFileId());
+            return;
+        }
+        String content = extractContent(event, user.get(), file.get());
+
+        // Open a new transaction to save the file content
+        TransactionUtil.handle(() -> {
+            // Save the file to database
+            FileDao fileDao = new FileDao();
+            File freshFile = fileDao.getActiveById(event.getFileId());
+            if (freshFile == null) {
+                // The file has been deleted since the text extraction started, ignore the result
+                return;
+            }
+
+            freshFile.setContent(content);
+            fileDao.update(freshFile);
+
+            // Update index with the updated file
+            if (isFileCreated) {
+                AppContext.getInstance().getIndexingHandler().createFile(freshFile);
+            } else {
+                AppContext.getInstance().getIndexingHandler().updateFile(freshFile);
+            }
+        });
+
+        FileUtil.endProcessingFile(event.getFileId());
+    }
+
+    /**
+     * Extract text content from a file.
+     * This is executed outside of a transaction.
+     *
+     * @param event File event
+     * @param user User whom created the file
+     * @param file Fresh file
+     * @return Text content
+     */
+    private String extractContent(FileEvent event, User user, File file) {
         // Find a format handler
-        final File file = event.getFile();
         FormatHandler formatHandler = FormatHandlerUtil.find(file.getMimeType());
         if (formatHandler == null) {
             log.info("Format unhandled: " + file.getMimeType());
-            FileUtil.endProcessingFile(file.getId());
-            return;
-        }
-
-        // Get the user from the database
-        UserDao userDao = new UserDao();
-        User user = userDao.getById(event.getUserId());
-        if (user == null) {
-            // The user has been deleted meanwhile
-            FileUtil.endProcessingFile(file.getId());
-            return;
+            return null;
         }
 
         // Generate file variations
@@ -132,28 +166,21 @@ public class FileProcessingAsyncListener {
                     ImageUtil.writeJpeg(thumbnail, outputStream);
                 }
             }
-        } catch (Exception e) {
-            log.error("Unable to generate thumbnails", e);
+        } catch (Throwable e) {
+            log.error("Unable to generate thumbnails for: " + file, e);
         }
 
         // Extract text content from the file
         long startTime = System.currentTimeMillis();
         String content = null;
+        log.info("Start extracting content from: " + file);
         try {
             content = formatHandler.extractContent(event.getLanguage(), event.getUnencryptedFile());
-        } catch (Exception e) {
-            log.error("Error extracting content from: " + event.getFile(), e);
+        } catch (Throwable e) {
+            log.error("Error extracting content from: " + file, e);
         }
-        log.info(MessageFormat.format("File content extracted in {0}ms", System.currentTimeMillis() - startTime));
+        log.info(MessageFormat.format("File content extracted in {0}ms: " + file.getId(), System.currentTimeMillis() - startTime));
 
-        // Save the file to database
-        FileDao fileDao = new FileDao();
-        if (fileDao.getActiveById(file.getId()) == null) {
-            // The file has been deleted since the text extraction started, ignore the result
-            return;
-        }
-
-        file.setContent(content);
-        fileDao.update(file);
+        return content;
     }
 }

docs-core/src/main/java/com/sismics/docs/core/listener/async/WebhookAsyncListener.java

@@ -36,7 +36,7 @@ public class WebhookAsyncListener {
     @Subscribe
     @AllowConcurrentEvents
     public void on(final DocumentCreatedAsyncEvent event) {
-        triggerWebhook(WebhookEvent.DOCUMENT_CREATED, event.getDocument().getId());
+        triggerWebhook(WebhookEvent.DOCUMENT_CREATED, event.getDocumentId());
     }
 
     @Subscribe
@@ -54,19 +54,19 @@ public class WebhookAsyncListener {
     @Subscribe
     @AllowConcurrentEvents
     public void on(final FileCreatedAsyncEvent event) {
-        triggerWebhook(WebhookEvent.FILE_CREATED, event.getFile().getId());
+        triggerWebhook(WebhookEvent.FILE_CREATED, event.getFileId());
     }
 
     @Subscribe
     @AllowConcurrentEvents
     public void on(final FileUpdatedAsyncEvent event) {
-        triggerWebhook(WebhookEvent.FILE_UPDATED, event.getFile().getId());
+        triggerWebhook(WebhookEvent.FILE_UPDATED, event.getFileId());
     }
 
     @Subscribe
     @AllowConcurrentEvents
     public void on(final FileDeletedAsyncEvent event) {
-        triggerWebhook(WebhookEvent.FILE_DELETED, event.getFile().getId());
+        triggerWebhook(WebhookEvent.FILE_DELETED, event.getFileId());
     }
 
     /**
@@ -86,7 +86,7 @@ public class WebhookAsyncListener {
             }
         });
 
-        RequestBody body = RequestBody.create(JSON, "{\"event\": \"" + event.name() + "\", \"id\": \"" + id + "\"}");
+        RequestBody body = RequestBody.create("{\"event\": \"" + event.name() + "\", \"id\": \"" + id + "\"}", JSON);
 
         for (String webhookUrl : webhookUrlList) {
             Request request = new Request.Builder()

docs-core/src/main/java/com/sismics/docs/core/model/context/AppContext.java

@@ -1,14 +1,15 @@
 package com.sismics.docs.core.model.context;
 
+import com.google.common.base.Strings;
 import com.google.common.collect.Lists;
 import com.google.common.eventbus.AsyncEventBus;
 import com.google.common.eventbus.EventBus;
 import com.sismics.docs.core.constant.Constants;
 import com.sismics.docs.core.dao.UserDao;
-import com.sismics.docs.core.event.RebuildIndexAsyncEvent;
 import com.sismics.docs.core.listener.async.*;
 import com.sismics.docs.core.model.jpa.User;
 import com.sismics.docs.core.service.FileService;
+import com.sismics.docs.core.service.FileSizeService;
 import com.sismics.docs.core.service.InboxService;
 import com.sismics.docs.core.util.PdfUtil;
 import com.sismics.docs.core.util.indexing.IndexingHandler;
@@ -65,6 +66,11 @@ public class AppContext {
      */
     private FileService fileService;
 
+    /**
+     * File size service.
+     */
+    private FileSizeService fileSizeService;
+
     /**
      * Asynchronous executors.
      */
@@ -81,7 +87,7 @@ public class AppContext {
             List<Class<? extends IndexingHandler>> indexingHandlerList = Lists.newArrayList(
                     new ClasspathScanner<IndexingHandler>().findClasses(IndexingHandler.class, "com.sismics.docs.core.util.indexing"));
             for (Class<? extends IndexingHandler> handlerClass : indexingHandlerList) {
-                IndexingHandler handler = handlerClass.newInstance();
+                IndexingHandler handler = handlerClass.getDeclaredConstructor().newInstance();
                 if (handler.accept()) {
                     indexingHandler = handler;
                     break;
@@ -102,12 +108,17 @@ public class AppContext {
         inboxService.startAsync();
         inboxService.awaitRunning();
 
+        // Start file size service
+        fileSizeService = new FileSizeService();
+        fileSizeService.startAsync();
+        fileSizeService.awaitRunning();
+
         // Register fonts
         PdfUtil.registerFonts();
 
         // Change the admin password if needed
         String envAdminPassword = System.getenv(Constants.ADMIN_PASSWORD_INIT_ENV);
-        if (envAdminPassword != null) {
+        if (!Strings.isNullOrEmpty(envAdminPassword)) {
             UserDao userDao = new UserDao();
             User adminUser = userDao.getById("admin");
             if (Constants.DEFAULT_ADMIN_PASSWORD.equals(adminUser.getPassword())) {
@@ -118,7 +129,7 @@ public class AppContext {
 
         // Change the admin email if needed
         String envAdminEmail = System.getenv(Constants.ADMIN_EMAIL_INIT_ENV);
-        if (envAdminEmail != null) {
+        if (!Strings.isNullOrEmpty(envAdminEmail)) {
             UserDao userDao = new UserDao();
             User adminUser = userDao.getById("admin");
             if (Constants.DEFAULT_ADMIN_EMAIL.equals(adminUser.getEmail())) {
@@ -172,7 +183,8 @@ public class AppContext {
         if (EnvironmentUtil.isUnitTest()) {
             return new EventBus();
         } else {
-            ThreadPoolExecutor executor = new ThreadPoolExecutor(8, 8,
+            int threadCount = Math.max(Runtime.getRuntime().availableProcessors() / 2, 2);
+            ThreadPoolExecutor executor = new ThreadPoolExecutor(threadCount, threadCount,
                     1L, TimeUnit.MINUTES,
                     new LinkedBlockingQueue<>());
             asyncExecutorList.add(executor);
@@ -237,6 +249,10 @@ public class AppContext {
             fileService.stopAsync();
         }
 
+        if (fileSizeService != null) {
+            fileSizeService.stopAsync();
+        }
+
         instance = null;
     }
 }

docs-core/src/main/java/com/sismics/docs/core/model/jpa/Acl.java

@@ -4,7 +4,7 @@ import com.google.common.base.MoreObjects;
 import com.sismics.docs.core.constant.AclType;
 import com.sismics.docs.core.constant.PermType;
 
-import javax.persistence.*;
+import jakarta.persistence.*;
 import java.util.Date;
 
 /**

docs-core/src/main/java/com/sismics/docs/core/model/jpa/AuditLog.java

@@ -2,12 +2,12 @@ package com.sismics.docs.core.model.jpa;
 
 import java.util.Date;
 
-import javax.persistence.Column;
-import javax.persistence.Entity;
-import javax.persistence.EnumType;
-import javax.persistence.Enumerated;
-import javax.persistence.Id;
-import javax.persistence.Table;
+import jakarta.persistence.Column;
+import jakarta.persistence.Entity;
+import jakarta.persistence.EnumType;
+import jakarta.persistence.Enumerated;
+import jakarta.persistence.Id;
+import jakarta.persistence.Table;
 
 import com.google.common.base.MoreObjects;
 import com.sismics.docs.core.constant.AuditLogType;

docs-core/src/main/java/com/sismics/docs/core/model/jpa/AuthenticationToken.java

@@ -2,10 +2,10 @@ package com.sismics.docs.core.model.jpa;
 
 import java.util.Date;
 
-import javax.persistence.Column;
-import javax.persistence.Entity;
-import javax.persistence.Id;
-import javax.persistence.Table;
+import jakarta.persistence.Column;
+import jakarta.persistence.Entity;
+import jakarta.persistence.Id;
+import jakarta.persistence.Table;
 
 import com.google.common.base.MoreObjects;
 

docs-core/src/main/java/com/sismics/docs/core/model/jpa/BaseFunction.java

@@ -1,9 +1,9 @@
 package com.sismics.docs.core.model.jpa;
 
-import javax.persistence.Column;
-import javax.persistence.Entity;
-import javax.persistence.Id;
-import javax.persistence.Table;
+import jakarta.persistence.Column;
+import jakarta.persistence.Entity;
+import jakarta.persistence.Id;
+import jakarta.persistence.Table;
 
 import com.google.common.base.MoreObjects;
 

docs-core/src/main/java/com/sismics/docs/core/model/jpa/Comment.java

@@ -2,10 +2,10 @@ package com.sismics.docs.core.model.jpa;
 
 import java.util.Date;
 
-import javax.persistence.Column;
-import javax.persistence.Entity;
-import javax.persistence.Id;
-import javax.persistence.Table;
+import jakarta.persistence.Column;
+import jakarta.persistence.Entity;
+import jakarta.persistence.Id;
+import jakarta.persistence.Table;
 
 import com.google.common.base.MoreObjects;
 

docs-core/src/main/java/com/sismics/docs/core/model/jpa/Config.java

@@ -1,11 +1,11 @@
 package com.sismics.docs.core.model.jpa;
 
-import javax.persistence.Column;
-import javax.persistence.Entity;
-import javax.persistence.EnumType;
-import javax.persistence.Enumerated;
-import javax.persistence.Id;
-import javax.persistence.Table;
+import jakarta.persistence.Column;
+import jakarta.persistence.Entity;
+import jakarta.persistence.EnumType;
+import jakarta.persistence.Enumerated;
+import jakarta.persistence.Id;
+import jakarta.persistence.Table;
 
 import com.google.common.base.MoreObjects;
 import com.sismics.docs.core.constant.ConfigType;

docs-core/src/main/java/com/sismics/docs/core/model/jpa/Contributor.java

@@ -1,9 +1,9 @@
 package com.sismics.docs.core.model.jpa;
 
-import javax.persistence.Column;
-import javax.persistence.Entity;
-import javax.persistence.Id;
-import javax.persistence.Table;
+import jakarta.persistence.Column;
+import jakarta.persistence.Entity;
+import jakarta.persistence.Id;
+import jakarta.persistence.Table;
 
 import com.google.common.base.MoreObjects;
 

docs-core/src/main/java/com/sismics/docs/core/model/jpa/Document.java

@@ -2,10 +2,10 @@ package com.sismics.docs.core.model.jpa;
 
 import com.google.common.base.MoreObjects;
 
-import javax.persistence.Column;
-import javax.persistence.Entity;
-import javax.persistence.Id;
-import javax.persistence.Table;
+import jakarta.persistence.Column;
+import jakarta.persistence.Entity;
+import jakarta.persistence.Id;
+import jakarta.persistence.Table;
 import java.util.Date;
 
 /**

docs-core/src/main/java/com/sismics/docs/core/model/jpa/DocumentMetadata.java

@@ -0,0 +1,91 @@
+package com.sismics.docs.core.model.jpa;
+
+import com.google.common.base.MoreObjects;
+
+import jakarta.persistence.Column;
+import jakarta.persistence.Entity;
+import jakarta.persistence.Id;
+import jakarta.persistence.Table;
+import java.io.Serializable;
+
+/**
+ * Link between a document and a metadata, holding the value.
+ * 
+ * @author bgamard
+ */
+@Entity
+@Table(name = "T_DOCUMENT_METADATA")
+public class DocumentMetadata implements Serializable {
+    /**
+     * Serial version UID.
+     */
+    private static final long serialVersionUID = 1L;
+
+    /**
+     * Document metadata ID.
+     */
+    @Id
+    @Column(name = "DME_ID_C", length = 36)
+    private String id;
+    
+    /**
+     * Document ID.
+     */
+    @Column(name = "DME_IDDOCUMENT_C", nullable = false, length = 36)
+    private String documentId;
+    
+    /**
+     * Metadata ID.
+     */
+    @Column(name = "DME_IDMETADATA_C", nullable = false, length = 36)
+    private String metadataId;
+
+    /**
+     * Value.
+     */
+    @Column(name = "DME_VALUE_C", length = 4000)
+    private String value;
+
+    public String getId() {
+        return id;
+    }
+
+    public void setId(String id) {
+        this.id = id;
+    }
+    
+    public String getDocumentId() {
+        return documentId;
+    }
+
+    public void setDocumentId(String documentId) {
+        this.documentId = documentId;
+    }
+
+    public String getMetadataId() {
+        return metadataId;
+    }
+
+    public DocumentMetadata setMetadataId(String metadataId) {
+        this.metadataId = metadataId;
+        return this;
+    }
+
+    public String getValue() {
+        return value;
+    }
+
+    public DocumentMetadata setValue(String value) {
+        this.value = value;
+        return this;
+    }
+
+    @Override
+    public String toString() {
+        return MoreObjects.toStringHelper(this)
+                .add("id", id)
+                .add("documentId", documentId)
+                .add("metadataId", metadataId)
+                .toString();
+    }
+}

docs-core/src/main/java/com/sismics/docs/core/model/jpa/DocumentTag.java

@@ -3,10 +3,10 @@ package com.sismics.docs.core.model.jpa;
 import java.io.Serializable;
 import java.util.Date;
 
-import javax.persistence.Column;
-import javax.persistence.Entity;
-import javax.persistence.Id;
-import javax.persistence.Table;
+import jakarta.persistence.Column;
+import jakarta.persistence.Entity;
+import jakarta.persistence.Id;
+import jakarta.persistence.Table;
 
 import com.google.common.base.MoreObjects;
 

docs-core/src/main/java/com/sismics/docs/core/model/jpa/File.java

@@ -4,7 +4,7 @@ import com.google.common.base.MoreObjects;
 import com.google.common.base.Strings;
 import com.sismics.util.mime.MimeTypeUtil;
 
-import javax.persistence.*;
+import jakarta.persistence.*;
 import java.util.Date;
 
 /**
@@ -49,7 +49,6 @@ public class File implements Loggable {
     /**
      * OCR-ized content.
      */
-    @Lob
     @Column(name = "FIL_CONTENT_C")
     private String content;
     
@@ -89,6 +88,14 @@ public class File implements Loggable {
     @Column(name = "FIL_LATESTVERSION_B", nullable = false)
     private boolean latestVersion;
 
+    public static final Long UNKNOWN_SIZE = -1L;
+
+    /**
+     * Can be {@link File#UNKNOWN_SIZE} if the size has not been stored in the database when the file has been uploaded
+     */
+    @Column(name = "FIL_SIZE_N", nullable = false)
+    private Long size;
+
     /**
      * Private key to decrypt the file.
      * Not saved to database, of course.
@@ -205,6 +212,18 @@ public class File implements Loggable {
         return this;
     }
 
+    /**
+     * Can return {@link File#UNKNOWN_SIZE} if the file size is not stored in the database.
+     */
+    public Long getSize() {
+        return size;
+    }
+
+    public File setSize(Long size) {
+        this.size = size;
+        return this;
+    }
+
     @Override
     public String toString() {
         return MoreObjects.toStringHelper(this)

docs-core/src/main/java/com/sismics/docs/core/model/jpa/Group.java

@@ -2,10 +2,10 @@ package com.sismics.docs.core.model.jpa;
 
 import java.util.Date;
 
-import javax.persistence.Column;
-import javax.persistence.Entity;
-import javax.persistence.Id;
-import javax.persistence.Table;
+import jakarta.persistence.Column;
+import jakarta.persistence.Entity;
+import jakarta.persistence.Id;
+import jakarta.persistence.Table;
 
 import com.google.common.base.MoreObjects;
 

docs-core/src/main/java/com/sismics/docs/core/model/jpa/Metadata.java

@@ -0,0 +1,92 @@
+package com.sismics.docs.core.model.jpa;
+
+import com.google.common.base.MoreObjects;
+import com.sismics.docs.core.constant.MetadataType;
+
+import jakarta.persistence.*;
+import java.util.Date;
+
+/**
+ * Metadata entity.
+ * 
+ * @author bgamard
+ */
+@Entity
+@Table(name = "T_METADATA")
+public class Metadata implements Loggable {
+    /**
+     * Metadata ID.
+     */
+    @Id
+    @Column(name = "MET_ID_C", length = 36)
+    private String id;
+    
+    /**
+     * Name.
+     */
+    @Column(name = "MET_NAME_C", length = 50, nullable = false)
+    private String name;
+
+    /**
+     * Type.
+     */
+    @Column(name = "MET_TYPE_C", length = 20, nullable = false)
+    @Enumerated(EnumType.STRING)
+    private MetadataType type;
+
+    /**
+     * Deletion date.
+     */
+    @Column(name = "MET_DELETEDATE_D")
+    private Date deleteDate;
+
+    public String getId() {
+        return id;
+    }
+
+    public Metadata setId(String id) {
+        this.id = id;
+        return this;
+    }
+
+    public String getName() {
+        return name;
+    }
+
+    public Metadata setName(String name) {
+        this.name = name;
+        return this;
+    }
+
+    public MetadataType getType() {
+        return type;
+    }
+
+    public Metadata setType(MetadataType type) {
+        this.type = type;
+        return this;
+    }
+
+    @Override
+    public Date getDeleteDate() {
+        return deleteDate;
+    }
+
+    public void setDeleteDate(Date deleteDate) {
+        this.deleteDate = deleteDate;
+    }
+
+    @Override
+    public String toString() {
+        return MoreObjects.toStringHelper(this)
+                .add("id", id)
+                .add("name", name)
+                .add("type", type)
+                .toString();
+    }
+
+    @Override
+    public String toMessage() {
+        return name;
+    }
+}

docs-core/src/main/java/com/sismics/docs/core/model/jpa/PasswordRecovery.java

@@ -2,10 +2,10 @@ package com.sismics.docs.core.model.jpa;
 
 import com.google.common.base.MoreObjects;
 
-import javax.persistence.Column;
-import javax.persistence.Entity;
-import javax.persistence.Id;
-import javax.persistence.Table;
+import jakarta.persistence.Column;
+import jakarta.persistence.Entity;
+import jakarta.persistence.Id;
+import jakarta.persistence.Table;
 import java.util.Date;
 
 /**

docs-core/src/main/java/com/sismics/docs/core/model/jpa/Relation.java

@@ -2,10 +2,10 @@ package com.sismics.docs.core.model.jpa;
 
 import java.util.Date;
 
-import javax.persistence.Column;
-import javax.persistence.Entity;
-import javax.persistence.Id;
-import javax.persistence.Table;
+import jakarta.persistence.Column;
+import jakarta.persistence.Entity;
+import jakarta.persistence.Id;
+import jakarta.persistence.Table;
 
 import com.google.common.base.MoreObjects;
 

docs-core/src/main/java/com/sismics/docs/core/model/jpa/Role.java

@@ -2,10 +2,10 @@ package com.sismics.docs.core.model.jpa;
 
 import java.util.Date;
 
-import javax.persistence.Column;
-import javax.persistence.Entity;
-import javax.persistence.Id;
-import javax.persistence.Table;
+import jakarta.persistence.Column;
+import jakarta.persistence.Entity;
+import jakarta.persistence.Id;
+import jakarta.persistence.Table;
 
 import com.google.common.base.MoreObjects;
 

docs-core/src/main/java/com/sismics/docs/core/model/jpa/RoleBaseFunction.java

@@ -2,10 +2,10 @@ package com.sismics.docs.core.model.jpa;
 
 import java.util.Date;
 
-import javax.persistence.Column;
-import javax.persistence.Entity;
-import javax.persistence.Id;
-import javax.persistence.Table;
+import jakarta.persistence.Column;
+import jakarta.persistence.Entity;
+import jakarta.persistence.Id;
+import jakarta.persistence.Table;
 
 import com.google.common.base.MoreObjects;
 

docs-core/src/main/java/com/sismics/docs/core/model/jpa/Route.java

@@ -2,10 +2,10 @@ package com.sismics.docs.core.model.jpa;
 
 import com.google.common.base.MoreObjects;
 
-import javax.persistence.Column;
-import javax.persistence.Entity;
-import javax.persistence.Id;
-import javax.persistence.Table;
+import jakarta.persistence.Column;
+import jakarta.persistence.Entity;
+import jakarta.persistence.Id;
+import jakarta.persistence.Table;
 import java.util.Date;
 
 /**

docs-core/src/main/java/com/sismics/docs/core/model/jpa/RouteModel.java

@@ -2,10 +2,10 @@ package com.sismics.docs.core.model.jpa;
 
 import com.google.common.base.MoreObjects;
 
-import javax.persistence.Column;
-import javax.persistence.Entity;
-import javax.persistence.Id;
-import javax.persistence.Table;
+import jakarta.persistence.Column;
+import jakarta.persistence.Entity;
+import jakarta.persistence.Id;
+import jakarta.persistence.Table;
 import java.util.Date;
 
 /**

docs-core/src/main/java/com/sismics/docs/core/model/jpa/RouteStep.java

@@ -4,7 +4,7 @@ import com.google.common.base.MoreObjects;
 import com.sismics.docs.core.constant.RouteStepTransition;
 import com.sismics.docs.core.constant.RouteStepType;
 
-import javax.persistence.*;
+import jakarta.persistence.*;
 import java.util.Date;
 
 /**

docs-core/src/main/java/com/sismics/docs/core/model/jpa/Share.java

@@ -2,10 +2,10 @@ package com.sismics.docs.core.model.jpa;
 
 import java.util.Date;
 
-import javax.persistence.Column;
-import javax.persistence.Entity;
-import javax.persistence.Id;
-import javax.persistence.Table;
+import jakarta.persistence.Column;
+import jakarta.persistence.Entity;
+import jakarta.persistence.Id;
+import jakarta.persistence.Table;
 
 import com.google.common.base.MoreObjects;
 

docs-core/src/main/java/com/sismics/docs/core/model/jpa/Tag.java

@@ -2,10 +2,10 @@ package com.sismics.docs.core.model.jpa;
 
 import java.util.Date;
 
-import javax.persistence.Column;
-import javax.persistence.Entity;
-import javax.persistence.Id;
-import javax.persistence.Table;
+import jakarta.persistence.Column;
+import jakarta.persistence.Entity;
+import jakarta.persistence.Id;
+import jakarta.persistence.Table;
 
 import com.google.common.base.MoreObjects;
 

docs-core/src/main/java/com/sismics/docs/core/model/jpa/User.java

@@ -2,10 +2,10 @@ package com.sismics.docs.core.model.jpa;
 
 import com.google.common.base.MoreObjects;
 
-import javax.persistence.Column;
-import javax.persistence.Entity;
-import javax.persistence.Id;
-import javax.persistence.Table;
+import jakarta.persistence.Column;
+import jakarta.persistence.Entity;
+import jakarta.persistence.Id;
+import jakarta.persistence.Table;
 import java.util.Date;
 
 /**

docs-core/src/main/java/com/sismics/docs/core/model/jpa/UserGroup.java

@@ -3,10 +3,10 @@ package com.sismics.docs.core.model.jpa;
 import java.io.Serializable;
 import java.util.Date;
 
-import javax.persistence.Column;
-import javax.persistence.Entity;
-import javax.persistence.Id;
-import javax.persistence.Table;
+import jakarta.persistence.Column;
+import jakarta.persistence.Entity;
+import jakarta.persistence.Id;
+import jakarta.persistence.Table;
 
 import com.google.common.base.MoreObjects;
 

docs-core/src/main/java/com/sismics/docs/core/model/jpa/Vocabulary.java

@@ -1,9 +1,9 @@
 package com.sismics.docs.core.model.jpa;
 
-import javax.persistence.Column;
-import javax.persistence.Entity;
-import javax.persistence.Id;
-import javax.persistence.Table;
+import jakarta.persistence.Column;
+import jakarta.persistence.Entity;
+import jakarta.persistence.Id;
+import jakarta.persistence.Table;
 
 import com.google.common.base.MoreObjects;
 

docs-core/src/main/java/com/sismics/docs/core/model/jpa/Webhook.java

@@ -3,7 +3,7 @@ package com.sismics.docs.core.model.jpa;
 import com.google.common.base.MoreObjects;
 import com.sismics.docs.core.constant.WebhookEvent;
 
-import javax.persistence.*;
+import jakarta.persistence.*;
 import java.util.Date;
 
 /**

docs-core/src/main/java/com/sismics/docs/core/service/FileService.java

@@ -69,13 +69,18 @@ public class FileService extends AbstractScheduledService {
         return Scheduler.newFixedDelaySchedule(0, 5, TimeUnit.SECONDS);
     }
 
+    public Path createTemporaryFile() throws IOException {
+        return createTemporaryFile(null);
+    }
+
     /**
      * Create a temporary file.
      *
+     * @param name Wanted file name
      * @return New temporary file
      */
-    public Path createTemporaryFile() throws IOException {
-        Path path = Files.createTempFile("sismics_docs", null);
+    public Path createTemporaryFile(String name) throws IOException {
+        Path path = Files.createTempFile("sismics_docs", name);
         referenceSet.add(new TemporaryPathReference(path, referenceQueue));
         return path;
     }
@@ -85,7 +90,7 @@ public class FileService extends AbstractScheduledService {
      *
      * @author bgamard
      */
-    class TemporaryPathReference extends PhantomReference<Path> {
+    static class TemporaryPathReference extends PhantomReference<Path> {
         String path;
         TemporaryPathReference(Path referent, ReferenceQueue<? super Path> q) {
             super(referent, q);

docs-core/src/main/java/com/sismics/docs/core/service/FileSizeService.java

@@ -0,0 +1,78 @@
+package com.sismics.docs.core.service;
+
+import com.google.common.util.concurrent.AbstractScheduledService;
+import com.sismics.docs.core.dao.FileDao;
+import com.sismics.docs.core.dao.UserDao;
+import com.sismics.docs.core.model.jpa.File;
+import com.sismics.docs.core.model.jpa.User;
+import com.sismics.docs.core.util.FileUtil;
+import com.sismics.docs.core.util.TransactionUtil;
+import org.slf4j.Logger;
+import org.slf4j.LoggerFactory;
+
+import java.util.List;
+import java.util.concurrent.TimeUnit;
+
+/**
+ * Service that retrieve files sizes when they are not in the database.
+ */
+public class FileSizeService extends AbstractScheduledService {
+    /**
+     * Logger.
+     */
+    private static final Logger log = LoggerFactory.getLogger(FileSizeService.class);
+
+    public FileSizeService() {
+    }
+
+    @Override
+    protected void startUp() {
+        log.info("File size service starting up");
+    }
+
+    @Override
+    protected void shutDown() {
+        log.info("File size service shutting down");
+    }
+
+    private static final int BATCH_SIZE = 30;
+    
+    @Override
+    protected void runOneIteration() {
+        try {
+            TransactionUtil.handle(() -> {
+                FileDao fileDao = new FileDao();
+                List<File> files = fileDao.getFilesWithUnknownSize(BATCH_SIZE);
+                for(File file : files) {
+                    processFile(file);
+                }
+                if(files.size() < BATCH_SIZE) {
+                    log.info("No more file to process, stopping the service");
+                    stopAsync();
+                }
+            });
+        } catch (Throwable e) {
+            log.error("Exception during file service iteration", e);
+        }
+    }
+
+    void processFile(File file) {
+        UserDao userDao = new UserDao();
+        User user = userDao.getById(file.getUserId());
+        if(user == null) {
+            return;
+        }
+
+        long fileSize = FileUtil.getFileSize(file.getId(), user);
+        if(fileSize != File.UNKNOWN_SIZE){
+            FileDao fileDao = new FileDao();
+            file.setSize(fileSize);
+            fileDao.update(file);
+        }
+    }
+
+    @Override
+    protected Scheduler scheduler() {
+        return Scheduler.newFixedDelaySchedule(0, 1, TimeUnit.MINUTES);
+    }
+}

docs-core/src/main/java/com/sismics/docs/core/service/InboxService.java

@@ -1,9 +1,10 @@
 package com.sismics.docs.core.service;
 
-import com.google.common.collect.Sets;
 import com.google.common.util.concurrent.AbstractScheduledService;
 import com.sismics.docs.core.constant.ConfigType;
 import com.sismics.docs.core.dao.TagDao;
+import com.sismics.docs.core.dao.criteria.TagCriteria;
+import com.sismics.docs.core.dao.dto.TagDto;
 import com.sismics.docs.core.event.DocumentCreatedAsyncEvent;
 import com.sismics.docs.core.model.jpa.Document;
 import com.sismics.docs.core.model.jpa.Tag;
@@ -11,17 +12,19 @@ import com.sismics.docs.core.util.ConfigUtil;
 import com.sismics.docs.core.util.DocumentUtil;
 import com.sismics.docs.core.util.FileUtil;
 import com.sismics.docs.core.util.TransactionUtil;
+import com.sismics.docs.core.util.jpa.SortCriteria;
 import com.sismics.util.EmailUtil;
 import com.sismics.util.context.ThreadLocalContext;
-import org.apache.commons.lang.StringUtils;
+import org.apache.commons.lang3.StringUtils;
 import org.slf4j.Logger;
 import org.slf4j.LoggerFactory;
 
 import javax.mail.*;
 import javax.mail.search.FlagTerm;
-import java.util.Date;
-import java.util.Properties;
+import java.util.*;
 import java.util.concurrent.TimeUnit;
+import java.util.regex.Matcher;
+import java.util.regex.Pattern;
 
 /**
  * Inbox scanning service.
@@ -79,22 +82,25 @@ public class InboxService extends AbstractScheduledService {
             lastSyncDate = new Date();
             lastSyncMessageCount = 0;
             try {
+                Map<String, String> tagsNameToId = getAllTags();
+
                 inbox = openInbox();
                 Message[] messages = inbox.search(new FlagTerm(new Flags(Flags.Flag.SEEN), false));
                 log.info(messages.length + " messages found");
                 for (Message message : messages) {
-                    importMessage(message);
+                    importMessage(message, tagsNameToId);
                     lastSyncMessageCount++;
                 }
             } catch (FolderClosedException e) {
                 // Ignore this, we will just continue importing on the next cycle
             } catch (Exception e) {
-                log.error("Error synching the inbox", e);
+                log.error("Error syncing the inbox", e);
                 lastSyncError = e.getMessage();
             } finally {
                 try {
                     if (inbox != null) {
-                        inbox.close(false);
+                        // The parameter controls if the messages flagged to be deleted, should actually get deleted.
+                        inbox.close(ConfigUtil.getConfigBooleanValue(ConfigType.INBOX_DELETE_IMPORTED));
                         inbox.getStore().close();
                     }
                 } catch (Exception e) {
@@ -150,6 +156,7 @@ public class InboxService extends AbstractScheduledService {
         String port = ConfigUtil.getConfigStringValue(ConfigType.INBOX_PORT);
         properties.put("mail.imap.host", ConfigUtil.getConfigStringValue(ConfigType.INBOX_HOSTNAME));
         properties.put("mail.imap.port", port);
+        properties.setProperty("mail.imap.starttls.enable", ConfigUtil.getConfigStringValue(ConfigType.INBOX_STARTTLS).toString());
         boolean isSsl = "993".equals(port);
         properties.put("mail.imap.ssl.enable", String.valueOf(isSsl));
         properties.setProperty("mail.imap.socketFactory.class",
@@ -172,7 +179,7 @@ public class InboxService extends AbstractScheduledService {
         store.connect(ConfigUtil.getConfigStringValue(ConfigType.INBOX_USERNAME),
                 ConfigUtil.getConfigStringValue(ConfigType.INBOX_PASSWORD));
 
-        Folder inbox = store.getFolder("INBOX");
+        Folder inbox = store.getFolder(ConfigUtil.getConfigStringValue(ConfigType.INBOX_FOLDER));
         inbox.open(Folder.READ_WRITE);
         return inbox;
     }
@@ -183,7 +190,7 @@ public class InboxService extends AbstractScheduledService {
      * @param message Message
      * @throws Exception e
      */
-    private void importMessage(Message message) throws Exception {
+    private void importMessage(Message message, Map<String, String> tags) throws Exception {
         log.info("Importing message: " + message.getSubject());
 
         // Parse the mail
@@ -194,12 +201,27 @@ public class InboxService extends AbstractScheduledService {
 
         // Create the document
         Document document = new Document();
-        document.setUserId("admin");
-        if (mailContent.getSubject() == null) {
-            document.setTitle("Imported email from EML file");
-        } else {
-            document.setTitle(StringUtils.abbreviate(mailContent.getSubject(), 100));
+        String subject = mailContent.getSubject();
+        if (subject == null) {
+            subject = "Imported email from EML file";
         }
+
+        HashSet<String> tagsFound = new HashSet<>();
+        if (tags != null) {
+            Pattern pattern = Pattern.compile("#([^\\s:#]+)");
+            Matcher matcher = pattern.matcher(subject);
+            while (matcher.find()) {
+                if (tags.containsKey(matcher.group(1)) && tags.get(matcher.group(1)) != null) {
+                    tagsFound.add(tags.get(matcher.group(1)));
+                    subject = subject.replaceFirst("#" + matcher.group(1), "");
+                }
+            }
+            log.debug("Tags found: " + String.join(", ", tagsFound));
+            subject = subject.trim().replaceAll(" +", " ");
+        }
+
+        document.setUserId("admin");
+        document.setTitle(StringUtils.abbreviate(subject, 100));
         document.setDescription(StringUtils.abbreviate(mailContent.getMessage(), 4000));
         document.setSubject(StringUtils.abbreviate(mailContent.getSubject(), 500));
         document.setFormat("EML");
@@ -220,14 +242,19 @@ public class InboxService extends AbstractScheduledService {
             TagDao tagDao = new TagDao();
             Tag tag = tagDao.getById(tagId);
             if (tag != null) {
-                tagDao.updateTagList(document.getId(), Sets.newHashSet(tagId));
+                tagsFound.add(tagId);
             }
         }
 
+        // Update tags
+        if (!tagsFound.isEmpty()) {
+            new TagDao().updateTagList(document.getId(), tagsFound);
+        }
+
         // Raise a document created event
         DocumentCreatedAsyncEvent documentCreatedAsyncEvent = new DocumentCreatedAsyncEvent();
         documentCreatedAsyncEvent.setUserId("admin");
-        documentCreatedAsyncEvent.setDocument(document);
+        documentCreatedAsyncEvent.setDocumentId(document.getId());
         ThreadLocalContext.get().addAsyncEvent(documentCreatedAsyncEvent);
 
         // Add files to the document
@@ -235,6 +262,29 @@ public class InboxService extends AbstractScheduledService {
             FileUtil.createFile(fileContent.getName(), null, fileContent.getFile(), fileContent.getSize(),
                     document.getLanguage(), "admin", document.getId());
         }
+
+        if (ConfigUtil.getConfigBooleanValue(ConfigType.INBOX_DELETE_IMPORTED)) {
+            message.setFlag(Flags.Flag.DELETED, true);
+        }
+    }
+
+    /**
+     * Fetches a HashMap with all tag names as keys and their respective ids as values.
+     *
+     * @return Map with all tags or null if not enabled
+     */
+    private Map<String, String> getAllTags() {
+        if (!ConfigUtil.getConfigBooleanValue(ConfigType.INBOX_AUTOMATIC_TAGS)) {
+            return null;
+        }
+        TagDao tagDao = new TagDao();
+        List<TagDto> tags = tagDao.findByCriteria(new TagCriteria().setTargetIdList(null), new SortCriteria(1, true));
+
+        Map<String, String> tagsNameToId = new HashMap<>();
+        for (TagDto tagDto : tags) {
+            tagsNameToId.put(tagDto.getName(), tagDto.getId());
+        }
+        return tagsNameToId;
     }
 
     public Date getLastSyncDate() {

docs-core/src/main/java/com/sismics/docs/core/util/ActionUtil.java

@@ -9,7 +9,7 @@ import com.sismics.docs.core.util.action.RemoveTagAction;
 import org.slf4j.Logger;
 import org.slf4j.LoggerFactory;
 
-import javax.json.JsonObject;
+import jakarta.json.JsonObject;
 
 /**
  * Action utilities.

docs-core/src/main/java/com/sismics/docs/core/util/AuditLogUtil.java

@@ -6,7 +6,7 @@ import com.sismics.docs.core.model.jpa.AuditLog;
 import com.sismics.docs.core.model.jpa.Loggable;
 import com.sismics.util.context.ThreadLocalContext;
 
-import javax.persistence.EntityManager;
+import jakarta.persistence.EntityManager;
 
 /**
  * Audit log utilities.

docs-core/src/main/java/com/sismics/docs/core/util/ConfigUtil.java

@@ -50,6 +50,19 @@ public class ConfigUtil {
         return Integer.parseInt(value);
     }
 
+    /**
+     * Returns the long value of a configuration parameter.
+     *
+     * @param configType Type of the configuration parameter
+     * @return Long value of the configuration parameter
+     * @throws IllegalStateException Configuration parameter undefined
+     */
+    public static long getConfigLongValue(ConfigType configType) {
+        String value = getConfigStringValue(configType);
+
+        return Long.parseLong(value);
+    }
+
     /**
      * Returns the boolean value of a configuration parameter.
      * 

docs-core/src/main/java/com/sismics/docs/core/util/DirectoryUtil.java

@@ -5,7 +5,7 @@ import java.nio.file.Files;
 import java.nio.file.Path;
 import java.nio.file.Paths;
 
-import org.apache.commons.lang.StringUtils;
+import org.apache.commons.lang3.StringUtils;
 
 import com.sismics.util.EnvironmentUtil;
 

docs-core/src/main/java/com/sismics/docs/core/util/FileUtil.java

@@ -1,6 +1,5 @@
 package com.sismics.docs.core.util;
 
-import com.google.common.base.Charsets;
 import com.google.common.base.Strings;
 import com.google.common.collect.Lists;
 import com.google.common.io.CharStreams;
@@ -17,7 +16,12 @@ import com.sismics.util.Scalr;
 import com.sismics.util.context.ThreadLocalContext;
 import com.sismics.util.io.InputStreamReaderThread;
 import com.sismics.util.mime.MimeTypeUtil;
-import org.apache.commons.lang.StringUtils;
+import org.apache.commons.io.IOUtils;
+import org.apache.commons.io.input.CountingInputStream;
+import org.apache.commons.io.output.NullOutputStream;
+import org.apache.commons.lang3.StringUtils;
+import org.slf4j.Logger;
+import org.slf4j.LoggerFactory;
 
 import javax.crypto.Cipher;
 import javax.crypto.CipherInputStream;
@@ -26,6 +30,7 @@ import java.awt.image.BufferedImage;
 import java.io.IOException;
 import java.io.InputStream;
 import java.io.InputStreamReader;
+import java.nio.charset.StandardCharsets;
 import java.nio.file.Files;
 import java.nio.file.Path;
 import java.util.*;
@@ -36,10 +41,15 @@ import java.util.*;
  * @author bgamard
  */
 public class FileUtil {
+    /**
+     * Logger.
+     */
+    private static final Logger log = LoggerFactory.getLogger(FileUtil.class);
+
     /**
      * File ID of files currently being processed.
      */
-    private static Set<String> processingFileSet = Collections.synchronizedSet(new HashSet<>());
+    private static final Set<String> processingFileSet = Collections.synchronizedSet(new HashSet<>());
     
     /**
      * Optical character recognition on an image.
@@ -69,19 +79,19 @@ public class FileUtil {
 
         // Consume the data as text
         try (InputStream is = process.getInputStream()) {
-            return CharStreams.toString(new InputStreamReader(is, Charsets.UTF_8));
+            return CharStreams.toString(new InputStreamReader(is, StandardCharsets.UTF_8));
         }
     }
 
     /**
      * Remove a file from the storage filesystem.
      * 
-     * @param file File to delete
+     * @param fileId ID of file to delete
      */
-    public static void delete(File file) throws IOException {
-        Path storedFile = DirectoryUtil.getStorageDirectory().resolve(file.getId());
-        Path webFile = DirectoryUtil.getStorageDirectory().resolve(file.getId() + "_web");
-        Path thumbnailFile = DirectoryUtil.getStorageDirectory().resolve(file.getId() + "_thumb");
+    public static void delete(String fileId) throws IOException {
+        Path storedFile = DirectoryUtil.getStorageDirectory().resolve(fileId);
+        Path webFile = DirectoryUtil.getStorageDirectory().resolve(fileId + "_web");
+        Path thumbnailFile = DirectoryUtil.getStorageDirectory().resolve(fileId + "_thumb");
         
         if (Files.exists(storedFile)) {
             Files.delete(storedFile);
@@ -126,7 +136,7 @@ public class FileUtil {
         // Validate global quota
         String globalStorageQuotaStr = System.getenv(Constants.GLOBAL_QUOTA_ENV);
         if (!Strings.isNullOrEmpty(globalStorageQuotaStr)) {
-            long globalStorageQuota = Long.valueOf(globalStorageQuotaStr);
+            long globalStorageQuota = Long.parseLong(globalStorageQuotaStr);
             long globalStorageCurrent = userDao.getGlobalStorageCurrent();
             if (globalStorageCurrent + fileSize > globalStorageQuota) {
                 throw new IOException("QuotaReached");
@@ -142,6 +152,7 @@ public class FileUtil {
         file.setName(StringUtils.abbreviate(name, 200));
         file.setMimeType(mimeType);
         file.setUserId(userId);
+        file.setSize(fileSize);
 
         // Get files of this document
         FileDao fileDao = new FileDao();
@@ -190,7 +201,7 @@ public class FileUtil {
         FileCreatedAsyncEvent fileCreatedAsyncEvent = new FileCreatedAsyncEvent();
         fileCreatedAsyncEvent.setUserId(userId);
         fileCreatedAsyncEvent.setLanguage(language);
-        fileCreatedAsyncEvent.setFile(file);
+        fileCreatedAsyncEvent.setFileId(file.getId());
         fileCreatedAsyncEvent.setUnencryptedFile(unencryptedFile);
         ThreadLocalContext.get().addAsyncEvent(fileCreatedAsyncEvent);
 
@@ -211,6 +222,7 @@ public class FileUtil {
      */
     public static void startProcessingFile(String fileId) {
         processingFileSet.add(fileId);
+        log.info("Processing started for file: " + fileId);
     }
 
     /**
@@ -220,6 +232,7 @@ public class FileUtil {
      */
     public static void endProcessingFile(String fileId) {
         processingFileSet.remove(fileId);
+        log.info("Processing ended for file: " + fileId);
     }
 
     /**
@@ -231,4 +244,31 @@ public class FileUtil {
     public static boolean isProcessingFile(String fileId) {
         return processingFileSet.contains(fileId);
     }
+
+    /**
+     * Get the size of a file on disk.
+     *
+     * @param fileId the file id
+     * @param user   the file owner
+     * @return the size or -1 if something went wrong
+     */
+    public static long getFileSize(String fileId, User user) {
+        // To get the size we copy the decrypted content into a null output stream
+        // and count the copied byte size.
+        Path storedFile = DirectoryUtil.getStorageDirectory().resolve(fileId);
+        if (! Files.exists(storedFile)) {
+            log.debug("File does not exist " + fileId);
+            return File.UNKNOWN_SIZE;
+        }
+        try (InputStream fileInputStream = Files.newInputStream(storedFile);
+             InputStream inputStream = EncryptionUtil.decryptInputStream(fileInputStream, user.getPrivateKey());
+             CountingInputStream countingInputStream = new CountingInputStream(inputStream);
+        ) {
+            IOUtils.copy(countingInputStream, NullOutputStream.NULL_OUTPUT_STREAM);
+            return countingInputStream.getByteCount();
+        } catch (Exception e) {
+            log.debug("Can't find size of file " + fileId, e);
+            return File.UNKNOWN_SIZE;
+        }
+    }
 }

docs-core/src/main/java/com/sismics/docs/core/util/MetadataUtil.java

@@ -0,0 +1,196 @@
+package com.sismics.docs.core.util;
+
+import com.google.common.collect.Maps;
+import com.sismics.docs.core.constant.MetadataType;
+import com.sismics.docs.core.dao.DocumentMetadataDao;
+import com.sismics.docs.core.dao.MetadataDao;
+import com.sismics.docs.core.dao.criteria.MetadataCriteria;
+import com.sismics.docs.core.dao.dto.DocumentMetadataDto;
+import com.sismics.docs.core.dao.dto.MetadataDto;
+import com.sismics.docs.core.model.jpa.DocumentMetadata;
+import com.sismics.docs.core.util.jpa.SortCriteria;
+
+import jakarta.json.Json;
+import jakarta.json.JsonArrayBuilder;
+import jakarta.json.JsonObjectBuilder;
+import java.text.MessageFormat;
+import java.util.List;
+import java.util.Map;
+
+/**
+ * Metadata utilities.
+ *
+ * @author bgamard
+ */
+public class MetadataUtil {
+    /**
+     * Update custom metadata on a document.
+     *
+     * @param documentId Document ID
+     * @param metadataIdList Metadata ID list
+     * @param metadataValueList Metadata value list
+     */
+    public static void updateMetadata(String documentId, List<String> metadataIdList, List<String> metadataValueList) throws Exception {
+        if (metadataIdList == null || metadataValueList == null || metadataIdList.isEmpty()) {
+            return;
+        }
+        if (metadataIdList.size() != metadataValueList.size()) {
+            throw new Exception("metadata_id and metadata_value must have the same length");
+        }
+
+        Map<String, String> newValues = Maps.newHashMap();
+        for (int i = 0; i < metadataIdList.size(); i++) {
+            newValues.put(metadataIdList.get(i), metadataValueList.get(i));
+        }
+
+        MetadataDao metadataDao = new MetadataDao();
+        DocumentMetadataDao documentMetadataDao = new DocumentMetadataDao();
+        List<MetadataDto> metadataDtoList = metadataDao.findByCriteria(new MetadataCriteria(), null);
+        List<DocumentMetadataDto> documentMetadataDtoList = documentMetadataDao.getByDocumentId(documentId);
+
+        // Update existing values
+        for (DocumentMetadataDto documentMetadataDto : documentMetadataDtoList) {
+            if (newValues.containsKey(documentMetadataDto.getMetadataId())) {
+                // Update the value
+                String value = newValues.get(documentMetadataDto.getMetadataId());
+                validateValue(documentMetadataDto.getType(), value);
+                updateValue(documentMetadataDto.getId(), value);
+                newValues.remove(documentMetadataDto.getMetadataId());
+            } else {
+                // Remove the value
+                updateValue(documentMetadataDto.getId(), null);
+            }
+        }
+
+        // Create new values
+        for (Map.Entry<String, String> entry : newValues.entrySet()) {
+            // Search the metadata definition
+            MetadataDto metadata = null;
+            for (MetadataDto metadataDto : metadataDtoList) {
+                if (metadataDto.getId().equals(entry.getKey())) {
+                    metadata = metadataDto;
+                    break;
+                }
+            }
+
+            if (metadata == null) {
+                throw new Exception(MessageFormat.format("Metadata not found: {0}", entry.getKey()));
+            }
+
+            // Add the value
+            validateValue(metadata.getType(), entry.getValue());
+            createValue(documentId, entry.getKey(), entry.getValue());
+        }
+    }
+
+    /**
+     * Validate a custom metadata value.
+     *
+     * @param type Metadata type
+     * @param value Value
+     * @throws Exception In case of validation error
+     */
+    private static void validateValue(MetadataType type, String value) throws Exception {
+        switch (type) {
+            case STRING:
+            case BOOLEAN:
+                return;
+            case DATE:
+                try {
+                    Long.parseLong(value);
+                } catch (NumberFormatException e) {
+                    throw new Exception("Date value not parsable as timestamp");
+                }
+                break;
+            case FLOAT:
+                try {
+                    Double.parseDouble(value);
+                } catch (NumberFormatException e) {
+                    throw new Exception("Float value not parsable");
+                }
+                break;
+            case INTEGER:
+                try {
+                    Integer.parseInt(value);
+                } catch (NumberFormatException e) {
+                    throw new Exception("Integer value not parsable");
+                }
+                break;
+        }
+    }
+
+    /**
+     * Create a custom metadata value on a document.
+     *
+     * @param documentId Document ID
+     * @param metadataId Metadata ID
+     * @param value Value
+     */
+    private static void createValue(String documentId, String metadataId, String value) {
+        DocumentMetadataDao documentMetadataDao = new DocumentMetadataDao();
+        DocumentMetadata documentMetadata = new DocumentMetadata();
+        documentMetadata.setDocumentId(documentId);
+        documentMetadata.setMetadataId(metadataId);
+        documentMetadata.setValue(value);
+        documentMetadataDao.create(documentMetadata);
+    }
+
+    /**
+     * Update a custom metadata value.
+     *
+     * @param documentMetadataId Document metadata ID
+     * @param value Value
+     */
+    private static void updateValue(String documentMetadataId, String value) {
+        DocumentMetadataDao documentMetadataDao = new DocumentMetadataDao();
+        DocumentMetadata documentMetadata = new DocumentMetadata();
+        documentMetadata.setId(documentMetadataId);
+        documentMetadata.setValue(value);
+        documentMetadataDao.update(documentMetadata);
+    }
+
+    /**
+     * Add custom metadata to a JSON response.
+     *
+     * @param json JSON
+     * @param documentId Document ID
+     */
+    public static void addMetadata(JsonObjectBuilder json, String documentId) {
+        DocumentMetadataDao documentMetadataDao = new DocumentMetadataDao();
+        MetadataDao metadataDao = new MetadataDao();
+        List<MetadataDto> metadataDtoList = metadataDao.findByCriteria(new MetadataCriteria(), new SortCriteria(1, true));
+        List<DocumentMetadataDto> documentMetadataDtoList = documentMetadataDao.getByDocumentId(documentId);
+        JsonArrayBuilder metadata = Json.createArrayBuilder();
+        for (MetadataDto metadataDto : metadataDtoList) {
+            JsonObjectBuilder meta = Json.createObjectBuilder()
+                    .add("id", metadataDto.getId())
+                    .add("name", metadataDto.getName())
+                    .add("type", metadataDto.getType().name());
+            for (DocumentMetadataDto documentMetadataDto : documentMetadataDtoList) {
+                if (documentMetadataDto.getMetadataId().equals(metadataDto.getId())) {
+                    if (documentMetadataDto.getValue() != null) {
+                        switch (metadataDto.getType()) {
+                            case STRING:
+                                meta.add("value", documentMetadataDto.getValue());
+                                break;
+                            case BOOLEAN:
+                                meta.add("value", Boolean.parseBoolean(documentMetadataDto.getValue()));
+                                break;
+                            case DATE:
+                                meta.add("value", Long.parseLong(documentMetadataDto.getValue()));
+                                break;
+                            case FLOAT:
+                                meta.add("value", Double.parseDouble(documentMetadataDto.getValue()));
+                                break;
+                            case INTEGER:
+                                meta.add("value", Integer.parseInt(documentMetadataDto.getValue()));
+                                break;
+                        }
+                    }
+                }
+            }
+            metadata.add(meta);
+        }
+        json.add("metadata", metadata);
+    }
+}

docs-core/src/main/java/com/sismics/docs/core/util/RoutingUtil.java

@@ -19,10 +19,10 @@ import com.sismics.docs.core.model.jpa.Document;
 import com.sismics.docs.core.model.jpa.RouteModel;
 import com.sismics.util.context.ThreadLocalContext;
 
-import javax.json.Json;
-import javax.json.JsonArray;
-import javax.json.JsonObject;
-import javax.json.JsonReader;
+import jakarta.json.Json;
+import jakarta.json.JsonArray;
+import jakarta.json.JsonObject;
+import jakarta.json.JsonReader;
 import java.io.StringReader;
 import java.util.List;
 

docs-core/src/main/java/com/sismics/docs/core/util/TagUtil.java

@@ -1,8 +1,8 @@
 package com.sismics.docs.core.util;
 
-import com.google.common.collect.Lists;
 import com.sismics.docs.core.dao.dto.TagDto;
 
+import java.util.ArrayList;
 import java.util.List;
 
 /**
@@ -12,14 +12,14 @@ import java.util.List;
  */
 public class TagUtil {
     /**
-     * Recursively find children of a tags.
+     * Recursively find children of a tag.
      *
      * @param parentTagDto Parent tag
      * @param allTagDtoList List of all tags
      * @return Children tags
      */
     public static List<TagDto> findChildren(TagDto parentTagDto, List<TagDto> allTagDtoList) {
-        List<TagDto> childrenTagDtoList = Lists.newArrayList();
+        List<TagDto> childrenTagDtoList = new ArrayList<>();
 
         for (TagDto tagDto : allTagDtoList) {
             if (parentTagDto.getId().equals(tagDto.getParentId())) {
@@ -32,15 +32,15 @@ public class TagUtil {
     }
 
     /**
-     * Find tags by name (start with).
+     * Find tags by name (start with, ignore case).
      *
      * @param name Name
      * @param allTagDtoList List of all tags
      * @return List of filtered tags
      */
     public static List<TagDto> findByName(String name, List<TagDto> allTagDtoList) {
-        List<TagDto> tagDtoList = Lists.newArrayList();
-        if (name == null || name.isEmpty()) {
+        List<TagDto> tagDtoList = new ArrayList<>();
+        if (name.isEmpty()) {
             return tagDtoList;
         }
         name = name.toLowerCase();

docs-core/src/main/java/com/sismics/docs/core/util/TransactionUtil.java

@@ -5,8 +5,8 @@ import com.sismics.util.jpa.EMF;
 import org.slf4j.Logger;
 import org.slf4j.LoggerFactory;
 
-import javax.persistence.EntityManager;
-import javax.persistence.EntityTransaction;
+import jakarta.persistence.EntityManager;
+import jakarta.persistence.EntityTransaction;
 
 /**
  * Database transaction utils.

docs-core/src/main/java/com/sismics/docs/core/util/action/Action.java

@@ -2,7 +2,7 @@ package com.sismics.docs.core.util.action;
 
 import com.sismics.docs.core.dao.dto.DocumentDto;
 
-import javax.json.JsonObject;
+import jakarta.json.JsonObject;
 
 /**
  * Base action interface.

docs-core/src/main/java/com/sismics/docs/core/util/action/AddTagAction.java

@@ -6,7 +6,7 @@ import com.sismics.docs.core.dao.criteria.TagCriteria;
 import com.sismics.docs.core.dao.dto.DocumentDto;
 import com.sismics.docs.core.dao.dto.TagDto;
 
-import javax.json.JsonObject;
+import jakarta.json.JsonObject;
 import java.util.List;
 import java.util.Set;
 

docs-core/src/main/java/com/sismics/docs/core/util/action/ProcessFilesAction.java

@@ -13,7 +13,7 @@ import com.sismics.util.context.ThreadLocalContext;
 import org.slf4j.Logger;
 import org.slf4j.LoggerFactory;
 
-import javax.json.JsonObject;
+import jakarta.json.JsonObject;
 import java.nio.file.Path;
 import java.util.List;
 
@@ -48,7 +48,7 @@ public class ProcessFilesAction implements Action {
                 FileUpdatedAsyncEvent event = new FileUpdatedAsyncEvent();
                 event.setUserId("admin");
                 event.setLanguage(documentDto.getLanguage());
-                event.setFile(file);
+                event.setFileId(file.getId());
                 event.setUnencryptedFile(unencryptedFile);
                 ThreadLocalContext.get().addAsyncEvent(event);
             }

docs-core/src/main/java/com/sismics/docs/core/util/action/RemoveTagAction.java

@@ -6,7 +6,7 @@ import com.sismics.docs.core.dao.criteria.TagCriteria;
 import com.sismics.docs.core.dao.dto.DocumentDto;
 import com.sismics.docs.core.dao.dto.TagDto;
 
-import javax.json.JsonObject;
+import jakarta.json.JsonObject;
 import java.util.List;
 import java.util.Set;
 

docs-core/src/main/java/com/sismics/docs/core/util/action/TagAction.java

@@ -4,7 +4,7 @@ import com.sismics.docs.core.dao.TagDao;
 import com.sismics.docs.core.dao.criteria.TagCriteria;
 import com.sismics.docs.core.dao.dto.TagDto;
 
-import javax.json.JsonObject;
+import jakarta.json.JsonObject;
 import java.util.List;
 
 /**

docs-core/src/main/java/com/sismics/docs/core/util/authentication/AuthenticationUtil.java

@@ -20,7 +20,7 @@ public class AuthenticationUtil {
 
                     .map(clazz -> {
                 try {
-                    return clazz.newInstance();
+                    return clazz.getDeclaredConstructor().newInstance();
                 } catch (Exception e) {
                     throw new RuntimeException(e);
                 }

docs-core/src/main/java/com/sismics/docs/core/util/authentication/LdapAuthenticationHandler.java

@@ -0,0 +1,107 @@
+package com.sismics.docs.core.util.authentication;
+
+import com.sismics.docs.core.constant.ConfigType;
+import com.sismics.docs.core.constant.Constants;
+import com.sismics.docs.core.dao.ConfigDao;
+import com.sismics.docs.core.dao.UserDao;
+import com.sismics.docs.core.model.jpa.Config;
+import com.sismics.docs.core.model.jpa.User;
+import com.sismics.docs.core.util.ConfigUtil;
+import com.sismics.util.ClasspathScanner;
+import org.apache.directory.api.ldap.model.cursor.EntryCursor;
+import org.apache.directory.api.ldap.model.entry.Attribute;
+import org.apache.directory.api.ldap.model.entry.Entry;
+import org.apache.directory.api.ldap.model.entry.Value;
+import org.apache.directory.api.ldap.model.message.SearchScope;
+import org.apache.directory.ldap.client.api.LdapConnection;
+import org.apache.directory.ldap.client.api.LdapConnectionConfig;
+import org.apache.directory.ldap.client.api.LdapNetworkConnection;
+import org.slf4j.Logger;
+import org.slf4j.LoggerFactory;
+
+import java.util.UUID;
+
+/**
+ * LDAP authentication handler.
+ *
+ * @author bgamard
+ */
+@ClasspathScanner.Priority(50) // Before the internal database
+public class LdapAuthenticationHandler implements AuthenticationHandler {
+    /**
+     * Logger.
+     */
+    private static final Logger log = LoggerFactory.getLogger(LdapAuthenticationHandler.class);
+
+    /**
+     * Get a LDAP connection.
+     * @return LdapConnection
+     */
+    private LdapConnection getConnection() {
+        ConfigDao configDao = new ConfigDao();
+        Config ldapEnabled = configDao.getById(ConfigType.LDAP_ENABLED);
+        if (ldapEnabled == null || !Boolean.parseBoolean(ldapEnabled.getValue())) {
+            return null;
+        }
+
+        LdapConnectionConfig config = new LdapConnectionConfig();
+        config.setLdapHost(ConfigUtil.getConfigStringValue(ConfigType.LDAP_HOST));
+        config.setLdapPort(ConfigUtil.getConfigIntegerValue(ConfigType.LDAP_PORT));
+        config.setUseSsl(ConfigUtil.getConfigBooleanValue(ConfigType.LDAP_USESSL));
+        config.setName(ConfigUtil.getConfigStringValue(ConfigType.LDAP_ADMIN_DN));
+        config.setCredentials(ConfigUtil.getConfigStringValue(ConfigType.LDAP_ADMIN_PASSWORD));
+
+        return new LdapNetworkConnection(config);
+    }
+
+    @Override
+    public User authenticate(String username, String password) {
+        // Fetch and authenticate the user
+        Entry userEntry;
+        try (LdapConnection ldapConnection = getConnection()) {
+            if (ldapConnection == null) {
+                return null;
+            }
+
+            EntryCursor cursor = ldapConnection.search(ConfigUtil.getConfigStringValue(ConfigType.LDAP_BASE_DN),
+                    ConfigUtil.getConfigStringValue(ConfigType.LDAP_FILTER).replace("USERNAME", username), SearchScope.SUBTREE);
+            if (cursor.next()) {
+                userEntry = cursor.get();
+                ldapConnection.bind(userEntry.getDn(), password);
+            } else {
+                // User not found
+                return null;
+            }
+        } catch (Exception e) {
+            log.error("Error authenticating \"" + username + "\" using the LDAP", e);
+            return null;
+        }
+
+        UserDao userDao = new UserDao();
+        User user = userDao.getActiveByUsername(username);
+        if (user == null) {
+            // The user is valid but never authenticated, create the user now
+            log.info("\"" + username + "\" authenticated for the first time, creating the internal user");
+            user = new User();
+            user.setRoleId(Constants.DEFAULT_USER_ROLE);
+            user.setUsername(username);
+            user.setPassword(UUID.randomUUID().toString()); // No authentication using the internal database
+            Attribute mailAttribute = userEntry.get("mail");
+            if (mailAttribute == null || mailAttribute.get() == null) {
+                user.setEmail(ConfigUtil.getConfigStringValue(ConfigType.LDAP_DEFAULT_EMAIL));
+            } else {
+                Value value = mailAttribute.get();
+                user.setEmail(value.getString());
+            }
+            user.setStorageQuota(ConfigUtil.getConfigLongValue(ConfigType.LDAP_DEFAULT_STORAGE));
+            try {
+                userDao.create(user, "admin");
+            } catch (Exception e) {
+                log.error("Error while creating the internal user", e);
+                return null;
+            }
+        }
+
+        return user;
+    }
+}

docs-core/src/main/java/com/sismics/docs/core/util/format/FormatHandlerUtil.java

@@ -26,12 +26,12 @@ public class FormatHandlerUtil {
     public static FormatHandler find(String mimeType) {
         try {
             for (Class<? extends FormatHandler> formatHandlerClass : FORMAT_HANDLERS) {
-                FormatHandler formatHandler = formatHandlerClass.newInstance();
+                FormatHandler formatHandler = formatHandlerClass.getDeclaredConstructor().newInstance();
                 if (formatHandler.accept(mimeType)) {
                     return formatHandler;
                 }
             }
-        } catch (InstantiationException | IllegalAccessException e) {
+        } catch (Exception e) {
             return null;
         }
 

docs-core/src/main/java/com/sismics/docs/core/util/format/PdfFormatHandler.java

@@ -6,6 +6,7 @@ import com.sismics.util.mime.MimeType;
 import org.apache.pdfbox.io.MemoryUsageSetting;
 import org.apache.pdfbox.multipdf.PDFMergerUtility;
 import org.apache.pdfbox.pdmodel.PDDocument;
+import org.apache.pdfbox.rendering.ImageType;
 import org.apache.pdfbox.rendering.PDFRenderer;
 import org.apache.pdfbox.text.PDFTextStripper;
 import org.slf4j.Logger;
@@ -60,7 +61,7 @@ public class PdfFormatHandler implements FormatHandler {
                 for (int pageIndex = 0; pageIndex < pdfDocument.getNumberOfPages(); pageIndex++) {
                     log.info("OCR page " + (pageIndex + 1) + "/" + pdfDocument.getNumberOfPages() + " of PDF file containing only images");
                     sb.append(" ");
-                    sb.append(FileUtil.ocrFile(language, renderer.renderImage(pageIndex)));
+                    sb.append(FileUtil.ocrFile(language, renderer.renderImageWithDPI(pageIndex, 300, ImageType.GRAY)));
                 }
                 return sb.toString();
             } catch (Exception e) {